Halosquirtibacter laminarini: K4L44_15245
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Entry
K4L44_15245 CDS
T10546
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
hlam Halosquirtibacter laminarini
Pathway
hlam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K4L44_15245 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlam03400
]
K4L44_15245 (recO)
DNA repair and recombination proteins [BR:
hlam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
K4L44_15245 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
K4L44_15245 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
iRhom1-2_N
Motif
Other DBs
NCBI-ProteinID:
QZE13884
LinkDB
All DBs
Position
3844938..3845609
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AA seq
223 aa
AA seq
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MEPIRTSAIVLGCNDYTTSKKIVKLLTPNFGKIECIVTGVSSKKGKIKRAYLQPSFNLEC
IVEKKNESKALYTLKEFHIKENYYTIPYDVLKSSQVFFLCEAIQKLTVEDTQQQLLYEFV
SNAFQMLDVSDKGAENFHIIFLFELLKIQGYPLSNNEIPLYKTKDIDYKELNIEDLNFNK
ITTLNWNRNIRNQWIELILRHIEITLNIRFRMKSLSILKQIFD
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggaacctatccgtacttcagcaatcgtattgggttgtaatgactataccacaagtaaa
aaaatagtcaaattactgactcctaattttggaaaaattgagtgtattgttacgggagta
tcgtcaaaaaaaggtaagatcaaaagagcttacctacaaccttcattcaacctagaatgt
atcgtagagaaaaagaatgaatccaaagctctgtacactttgaaagagtttcatataaaa
gagaactattatacaataccatatgacgtcctaaaatctagccaagtgttctttctatgt
gaagccatacagaagttaacagtggaagatacccaacaacaactcctatatgaatttgtc
tctaatgcgtttcaaatgctagatgtctcagataaaggggcagaaaacttccatattata
tttctttttgaactactaaaaatacaaggatatccattatcaaataatgagatcccttta
tataaaacaaaggatatcgattataaagagttaaacatagaggatcttaacttcaataaa
ataacgacgctcaattggaatagaaacataagaaatcaatggatagagcttatactaaga
catattgagatcactcttaatattcgctttagaatgaaatcgctatcaattctcaaacaa
atttttgattaa
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