Halosquirtibacter laminarini: K4L44_16455
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Entry
K4L44_16455 CDS
T10546
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hlam Halosquirtibacter laminarini
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlam03032
]
K4L44_16455 (topA)
03400 DNA repair and recombination proteins [BR:
hlam03400
]
K4L44_16455 (topA)
Enzymes [BR:
hlam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K4L44_16455 (topA)
DNA replication proteins [BR:
hlam03032
]
Prokaryotic type
DNA Topoisomerases
K4L44_16455 (topA)
DNA repair and recombination proteins [BR:
hlam03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K4L44_16455 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QZE14099
LinkDB
All DBs
Position
4147768..4150224
Genome browser
AA seq
818 aa
AA seq
DB search
MKEENLVIVESPAKAKTIEKFLGKDFLVMSSFGHIRDLDKKDFGIDLKNNYIPRYVVSED
KKKVVAELKKAAKNAKTIWIASDEDREGEAIGWHLMEVLGLSPDTTKRIVFHEITKSAIT
KAIDNPRLLDLNLVDAQQARRILDRLVGFEISPVLWKKVKPSLSAGRVQSVAVRLIVDQE
REIQKFQPTSAYRVTSLFHTEDEKVGSSELKAELSTRFKTFDETKHFLDQCNGASFHIES
IVKKPAKKSPTPPFITSTLQQEASRKLGFPVSMTMSVAQKLYEAGKITYMRTDSTNLSQL
ALDAAKETIVEKYGDKYYHLRTFKTKAKGAQEAHEAIRPTYMNQATVPGTPQEQKLYELI
WKRTIASQMADAKLERTTVKIGVSGTDEHFVATGEILVFDGFLSVYLESTDDEGQENPIH
KGLLPPLNEGEVLVPSEIVGTQRFTQKPPRFTEASLVRKLEEQGIGRPSTYAPTITTIQN
RNYIVKEDRDGTEREYQRLLLQDGHLDSETCTEITGAERGKLFPTDIGLVVNDFLVKNFD
SIVDYKFTAKVEKEFDEIAEGKRVWNEMIDEFYVPFHANIEDVIENSERSSGERILGVDP
KTEKPVSVRIGRYGPMAQLGESKEDSEEKPQFASLRHGQSIETITLEEALDLFKLPRQLG
EYEEKVVTVSVGRFGPYVRHDSKFVSLKKDVDDPLTIELDRAVELIEEKREKDRKALLKT
FEEDVDLRVIMGRWGPYIAYQKSNYKIPKDTVVEDLSFEDCMKVVEEGPKPKKAAAKKTA
TKKAATKKTTTKKTTKTTAAKKTVTKKKTTTKSSSEKK
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagaaaatctggtaatagtcgagtcaccagccaaagcgaagaccatagagaaa
tttcttggtaaagatttcttggtcatgtcaagtttcggacatatccgagaccttgataaa
aaggactttgggattgacttgaaaaataattatataccacgctatgtggtttcagaagat
aaaaaaaaggtagttgctgaattaaagaaagcagcgaagaacgcgaaaactatatggatc
gcatccgatgaggaccgtgaaggggaagcaattggatggcatcttatggaagtacttggt
cttagtcctgatacgactaaacgtattgtatttcatgagattaccaagagtgcgattacc
aaagcgatagataatccaagactattggatctaaatctggtagatgcccaacaggctcgt
cgtattttggatcgattggtaggttttgagatctctcctgttctttggaagaaggtaaaa
ccctctctttcggcaggtcgtgttcagtctgttgctgtgagacttattgtagatcaagag
cgagaaatccagaaatttcagcctacttctgcatatcgtgtcacttcactttttcataca
gaagatgaaaaagtggggagctcagagttaaaggcagaactttcaactcgttttaaaact
tttgatgagacgaagcatttcttagaccaatgtaatggtgcatcgttccatattgaatca
attgttaaaaagcctgcgaagaaatcaccaacgccaccttttattacttctacgttgcag
caagaggcaagtcgtaaacttggttttcctgtaagtatgactatgtccgttgctcaaaag
ctatatgaggctggaaaaattacttatatgcgtaccgactcgacaaacctttcacagttg
gctttagatgctgcgaaagagactattgtggagaagtatggtgataagtattatcactta
agaacatttaagactaaggccaaaggtgcacaggaagctcacgaggcaatccgtcctact
tatatgaatcaggctactgtacctggtacaccgcaagaacaaaagctatatgagttgata
tggaaaagaaccattgcttctcaaatggcagatgccaaactagaacgaaccaccgtgaaa
atcggtgtttcaggaacagatgagcattttgtcgcaacaggtgagatccttgtttttgat
ggtttcttaagtgtgtatcttgaatctacagacgatgaagggcaagagaatccaattcac
aaggggttattgccacctttgaatgagggggaagtgttggttccatctgagatcgttgga
acgcagcgttttacccagaagcctcctcgatttacagaggcaagtttggtacgaaaactt
gaagaacagggtattggacgtccttctacttatgctccgaccattacaacaatacagaat
agaaactatattgtaaaagaagatcgtgatgggactgaacgtgagtatcaacgtttattg
cttcaagatggtcatctagattccgagacttgtactgagattactggtgctgagagagga
aagctattcccaactgatattgggttggttgtaaatgatttcttggtgaagaactttgac
tctattgtcgactataagtttacagcaaaggttgaaaaggagtttgatgagattgcggaa
ggtaagcgtgtgtggaacgaaatgatagatgaattctatgtgccatttcatgctaatatc
gaagatgtaattgaaaattcagaacgatcttcaggagagcgtatcttgggtgttgatccg
aagaccgaaaagcctgtctctgttcgtattggacgttatggaccaatggcacaacttggt
gaatcaaaagaggatagcgaagagaaacctcagtttgcaagcttgagacatggtcaaagt
attgaaacaattaccctagaggaggctttagatctatttaaattgcctcgtcaacttgga
gaatacgaagaaaaggtggtgactgtaagtgtcggaagatttggtccttatgtgcgccat
gatagtaaatttgtctctttaaagaaagacgtagacgatccgcttacgattgaattggat
cgtgctgtagagttgatcgaggaaaaaagagagaaagatagaaaagcactattgaaaact
ttcgaggaagatgtcgatttgagagtaattatgggacgttggggaccatatattgcttac
caaaagtcgaactataagattcctaaggatacagtagtcgaagatttatcgttcgaagac
tgtatgaaggttgtcgaagaaggaccaaagcctaaaaaagctgctgcaaaaaagacggca
acgaagaaggctgctactaaaaagactaccaccaaaaagacaacgaagactacagctgca
aaaaagactgtaacgaaaaagaaaacgactacaaagagtagttcggaaaagaaatag
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