Halosquirtibacter laminarini: K4L44_17280
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Entry
K4L44_17280 CDS
T10546
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
hlam Halosquirtibacter laminarini
Brite
KEGG Orthology (KO) [BR:
hlam00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
K4L44_17280 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlam03019
]
K4L44_17280 (rnc)
03009 Ribosome biogenesis [BR:
hlam03009
]
K4L44_17280 (rnc)
03036 Chromosome and associated proteins [BR:
hlam03036
]
K4L44_17280 (rnc)
Enzymes [BR:
hlam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
K4L44_17280 (rnc)
Messenger RNA biogenesis [BR:
hlam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K4L44_17280 (rnc)
Ribosome biogenesis [BR:
hlam03009
]
Eukaryotic type
90S particles
RNase
K4L44_17280 (rnc)
Prokaryotic type
rRNA processing factors
K4L44_17280 (rnc)
Chromosome and associated proteins [BR:
hlam03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
K4L44_17280 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Mycovirus_RNAse
DSRM_2
CDO_I
Motif
Other DBs
NCBI-ProteinID:
QZE16029
LinkDB
All DBs
Position
4348959..4349612
Genome browser
AA seq
217 aa
AA seq
DB search
MLGVTPGKLLFYDIAFIHKSASTTDLRGCPVNNERLEYLGDAILGAVVADYLFKRFPNKD
EGFLTQMRSKLVNRSFLTKLTFQTGLDRYVESTTNSKNETSHIYGDAFEALIGALYLDKG
YEVTQRVIVQSIIRKYVNINEVQEVNTNFKSQLIEWGQKNKVSVTFDTYEESRQQSNLPP
FIAVVKIDGQKRGNGRGYSKKEAQQNAAKSAFEKMDI
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgttaggagttactccagggaaacttctattttatgatattgctttcattcataaatcg
gcatctacaacagatctacgagggtgccctgtaaataatgagcgtcttgaatatcttggt
gatgctatactaggagctgttgttgcagattacttgttcaaaaggtttccaaataaagat
gagggttttttaacccagatgagatctaagttagtgaatcgctcatttttaacgaaactt
acattccaaacaggtttagaccgatacgttgaatctacaaccaattcgaagaatgagaca
agtcatatttatggagatgcttttgaagcgcttattggtgctttatatcttgataaagga
tatgaagtgacgcaaagagtgatcgttcaaagtattattcgaaaatatgtaaatatcaat
gaagtacaggaggttaatacaaatttcaaaagtcaattgatagagtggggacaaaaaaat
aaagtctcagtaacttttgatacctatgaggagtctcgtcaacagtccaacttgcctcca
tttatcgcagtagtaaagatagatgggcaaaaacgtggaaatgggagagggtattcgaaa
aaagaagcacagcagaatgctgctaagagtgcttttgagaaaatggacatataa
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