Halomonas litopenaei: ACS8MR_17515
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Entry
ACS8MR_17515 CDS
T11742
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hlb Halomonas litopenaei
Pathway
hlb03030
DNA replication
hlb03430
Mismatch repair
hlb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hlb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACS8MR_17515 (dnaE)
03430 Mismatch repair
ACS8MR_17515 (dnaE)
03440 Homologous recombination
ACS8MR_17515 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlb03032
]
ACS8MR_17515 (dnaE)
03400 DNA repair and recombination proteins [BR:
hlb03400
]
ACS8MR_17515 (dnaE)
Enzymes [BR:
hlb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACS8MR_17515 (dnaE)
DNA replication proteins [BR:
hlb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACS8MR_17515 (dnaE)
DNA repair and recombination proteins [BR:
hlb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACS8MR_17515 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
XZE91067
LinkDB
All DBs
Position
complement(4066332..4069841)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSAPFVHLRVHSEFSLVDGLVRLKPYVKAGIEHGAPALALTDEANLFGLVKFYNGVQGAG
MKPVIGADLWLVNGHDLDHPYRVTLLAMNDVGYRNLTELISRGWVEGQRQGRAYLEKAWI
LEQNEGLIALSGGRDGDVGRHLLSDLHADARRLLDDWCQAFPGRFYLELTRTGRPLEEDC
VHASVALALDTGVPVVATNDVRFLKREDFWAHETRVSIGEGKALDDPRRERRYTEEQYLK
SPQEMAELFADIPEALENSVMIAARCNVDVRLGEIFLPEYGIPEGMTQDEFFRKISHDGL
TERLDALYPVEQHPRDSEEWAALEQRYRERLDFELNIILQMGFPGYFLIVMDFIQWAKDN
DVPVGPGRGSGAGSLVAYAQKITDLDPIQYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVAERYGRNAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLAKA
IKEEPQLKEFLEADEEAQEIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEDAGLVKFDFLGLRTLTIIDWALEMVDKVRSKEGQGPLDIDTIPLDDG
KTFEMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAEISYPHPDYQHELLKPVLQPTYGIILYQEQVMQIAQVMAGYSLGQADLLRRAMGK
KKPEEMAKQRAGFMEGCAANGIDADLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYKFTVDDEGRVVYG
LGAIRGVGEGPIGAIVEARSTDGPFSDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPN
RAVLAASLDDALKAAAQSHKNQSAGMMDLFGEAFAPDEDDSASDPYADYLRVREWSDRER
LAGEKDTLGLYLTGHPIDEYEEELSRFVSTRIADLKPSREPQRVAGLVVAQRTMKSKRGD
TMAFVTLDDRTGRIEASLFGELYDSVREQLDNAEVLIIEGEVSSDDYSGGLRLRGKEVTP
MVQARSRFGQAVEVSVDGREANGRLIDSLRTSLEPHRHQEGLPVRLRYRNLEATGWLELD
DQWKVLPSDDLLIALREVEGQDGVRLKYR
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcccttcgttcatcttcgcgtccacagcgagttctccctcgtcgatggcctg
gtgcgcctcaagccgtacgtcaaggcgggcatcgaacacggggcgccggcgctggcgctg
accgacgaggccaacctgttcggcctggtgaagttctacaacggcgtccagggcgccggc
atgaagccggtgatcggtgccgatctgtggctggtcaacggccatgatctggatcatccc
tatcgggtgaccctgctggcgatgaacgacgtcggctaccgcaatctgaccgagctgatc
tcgcggggctgggtcgagggccagcgccaggggcgggcctacctggagaaggcctggata
ctcgaacagaacgaggggttgattgcgctgtccggcggccgcgacggtgatgtcgggcgc
cacctgctcagcgaccttcacgccgacgccaggcgcctgctggacgattggtgtcaggcc
ttcccgggacgtttctacctggagctgacccgcaccggccgcccgctggaagaagactgc
gtacacgcctcggtagcgctggcgctggacaccggagtgccggtggtggccaccaatgac
gtgcgcttcctgaagcgcgaggacttctgggcccacgagacccgggtttccatcggcgag
ggcaaggcgctcgacgatccccggcgcgagcgccgttacaccgaagagcagtacctgaag
tcgccccaggagatggccgagctgttcgccgatattcccgaggcgctcgaaaacagcgtg
atgatcgccgcgcgctgcaacgtcgacgtgcgtctgggcgagatcttcctgccggagtac
ggcatccccgagggcatgacccaggacgaattctttcgcaagatctctcacgacggcctg
accgagcgcctcgatgcgctctatccggtcgagcagcacccccgcgacagtgaagaatgg
gcggccctcgagcaacgctaccgcgaacgcctggacttcgagctgaacatcattctgcag
atggggttccctggctacttcctgatcgtgatggacttcatccagtgggccaaggacaac
gacgtgccggtggggccggggcgggggtccggtgccggctcgctggtggcctacgcccag
aagatcaccgacctcgacccgatccagtacgacctgctgttcgagcgcttcctcaacccg
gaacgtgtctccatgcccgacttcgacgtcgacttctgcatggagaagcgcgaccgggtc
atcgactacgtggccgagcgctacggccgcaacgcggtgtcccagatcgtgaccttcggc
accatggccgccaaggcggtggtgcgcgacgtggcccgggcccagggcaagccctactcg
ctgggggacaagctgtccaagctgatccccttcgaggtcggcatgaccctggccaaggcc
atcaaggaggagcctcagctcaaggagtttctcgaggccgacgaggaggcccaggaaatc
tgggacatggcgctcaagctcgagggcgtgacccgggggaccggcaagcacgccggtggc
gtggtgatcgcccccaccaagttgaccgacttctcgccgctgttgtgcgacgaggatggc
tccggcctggtggtgcagttcgacaagaacgatatcgaggacgccggcctggtcaagttc
gactttcttggcctgcgtaccctgaccatcatcgactgggcgttggagatggtcgacaag
gtgcgctcgaaggagggccagggaccgctcgatatcgataccattccgctggacgacggc
aagaccttcgagatgctcaagaaggccgagaccaccgccgtgttccagctcgaatcccgc
ggcatgaaggagctgatcaagcgtctgctgccggactcgctggaggacatgatcgccctg
gtggcactgttccgtcccggtccgctgcagtccggcatggtcgacgacttcatcaaccgc
aagcacggtcgggcggagatctcctatccgcacccggactaccagcacgaactgctcaag
ccggtgctgcagcccacctacggcatcatcctgtaccaggagcaggtgatgcagatcgct
caggtgatggccggctactcgctgggccaggccgacctgctgcgtcgtgccatgggcaag
aagaagccggaagagatggccaagcagcgcgccggcttcatggaaggctgcgcggccaac
ggcatcgacgctgaccttgcgggcaatatcttcgacctggtggagaagttcgccggttac
ggcttcaacaagtcgcactcggccgcctacgccctggtgtcctaccagaccgcctggctc
aaggcccactacccgggtcccttcatggcggcggtaatgtccaccgagatggacaacctc
gacaaggtggtgccgctgatcgaggagtgtcgtcacctcaagctgacggtgaccccaccg
gacgtcaatgtcggcggctacaagttcaccgtcgacgacgagggacgggtggtctacggt
ctgggcgcgattcgtggcgtcggcgaggggcccatcggcgccatcgtcgaggcgcgcagc
acagacggccccttcagcgacctgttcgacttctgtcggcggatcgatcccaagcgcatg
aacaagcgtaccctggaagccttgatccgctccggggcgctggacaacctgggacccaac
cgcgccgtgctggccgcctcgctggatgacgccctgaaggccgcggcacagagccacaag
aaccagagcgccgggatgatggatctgttcggcgaggccttcgccccggacgaggacgac
agcgccagcgatccctacgccgactacctgcgggtgcgtgagtggagcgaccgcgagcgc
ctggccggcgagaaggacaccctggggctctacctgaccggccatcccatcgatgaatac
gaggaagagctttcgcgcttcgtctcgacccgcatcgccgacctgaagccctctcgagag
ccccagcgggtcgccggcctggtggtggcccagcgcaccatgaagtccaagcgtggcgac
accatggcatttgtgaccctcgacgaccgtaccgggcgcatcgaggcgtcgctgtttggt
gagctttacgacagcgtgcgcgagcagctcgacaacgccgaggtgctgatcatcgaaggc
gaggtgtccagcgacgactactccggcggcctgcgcctgcgtggcaaggaggtcaccccc
atggtccaggcgcgctcgcgcttcggtcaggcggtggaagtctcggtggatggtcgtgag
gccaacggacgactgatcgacagcctgcgcacgagcctcgagcctcatcgtcaccaggaa
ggcctgccggtgcgcctgcgctaccgcaacctggaggccaccggctggctcgaactcgac
gaccagtggaaggtgctgccatccgacgacctgctgatcgcgctgcgtgaggtcgagggg
caggacggcgtccgcctcaagtatcgctag
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