Natronobacterium lacisalsi: CHINAEXTREME02800
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Entry
CHINAEXTREME02800 CDS
T04669
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc03030
DNA replication
hlc03420
Nucleotide excision repair
hlc03430
Mismatch repair
hlc03440
Homologous recombination
hlc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHINAEXTREME02800
03420 Nucleotide excision repair
CHINAEXTREME02800
03430 Mismatch repair
CHINAEXTREME02800
03440 Homologous recombination
CHINAEXTREME02800
03460 Fanconi anemia pathway
CHINAEXTREME02800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hlc03000
]
CHINAEXTREME02800
03032 DNA replication proteins [BR:
hlc03032
]
CHINAEXTREME02800
03400 DNA repair and recombination proteins [BR:
hlc03400
]
CHINAEXTREME02800
Transcription factors [BR:
hlc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
CHINAEXTREME02800
DNA replication proteins [BR:
hlc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
CHINAEXTREME02800
DNA repair and recombination proteins [BR:
hlc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
CHINAEXTREME02800
MMR (mismatch excision repair)
CHINAEXTREME02800
DSBR (double strand breaks repair)
HR (homologous recombination)
CHINAEXTREME02800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_MEIOB_N
OB_Ssb-like
POT1PC
SHLD2_OB1
Motif
Other DBs
NCBI-ProteinID:
APW96766
UniProt:
M0LNH2
LinkDB
All DBs
Position
603493..604956
Genome browser
AA seq
487 aa
AA seq
DB search
MSDIEGVYEDLEADVSLEEFREAVEAKVEQMGGLADEETAAMLVAHEVGESEVGGIADIE
PGMEEAKFVAKVISIGDVRTFERDGEDEDGRVVNVEVADETGSVRAAFWDEHAEAATEEL
EEGDVLRIKGRPKDGFSGVEVSVDEAEPDEDTEVDVQVSDTYDVEDLSLGLSNVNLVGLV
LDTDSVRTFDRDDGSEGKVSNVTLGDSTGRIRVTLWDEQAETAEELEAGTTVEVVDGYVR
ERDGNLELHVGNRGAIEEVDEEVEYVPDSTPIEDVEMGQTVDLAGVVRSADPKRTFDRDD
GSEGQVRNVRIQDATGDIRVALWGEKADLDVGPGDEIALGDVEIQDGWQDDLEASAGWQS
TITVLDSDSAPETGSSGGADDAGTENNAGLSAFADDGDESDESDEPSADTAGTEADDDGS
DASGEGDPSDGEELEFTGVVVQAGDPVVLDDGETTMSVATDVDVGLGEEVTARGVVRDGR
LEANDVF
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatcgagggtgtttacgaggatctcgaggccgacgtctctctcgaggagttt
cgcgaggccgtcgaggcgaaagtcgagcagatggggggactggcggacgaggagacggcg
gcgatgctcgtcgctcacgaggtcggcgagagcgaggtcggcggcatcgccgacatcgaa
cccgggatggaggaggcgaagttcgtcgcgaaggtgatctccatcggcgacgttcgcacg
ttcgaacgcgacggggaggacgaggacggccgcgtcgtcaacgtcgaagtggcggacgag
accggctccgtgcgcgccgccttctgggacgagcacgccgaagcggcgaccgaagaactc
gaggagggcgacgtgttgcggatcaagggccggcccaaggacggtttttcgggcgtcgag
gtcagcgtcgacgaggccgaaccggacgaggacaccgaggtcgacgtccaggtctcggac
acgtacgacgtcgaggacctctcgctcgggctgtcgaacgtcaacctcgtcggactcgtg
ctggacacagacagcgtccggacgttcgaccgcgacgacggctccgaggggaaggtctcg
aacgtcacgctgggcgattcgaccggacgaatccgcgtgaccctgtgggacgaacaggcc
gagacggccgaggaactcgaggccggaacgacggtcgaggtcgtcgacggctacgtccgc
gaacgcgacggcaatctcgaactccacgtcggcaaccgcggcgcgatcgaggaggtcgac
gaggaggtcgagtacgtccccgacagcacgccgatcgaggacgtggagatgggacagacg
gtcgacctcgcgggggtcgtccgctccgcggatccgaaacggaccttcgatcgggacgac
ggctcggagggacaggtccggaacgtccgcatccaggacgcgaccggcgacattcgcgtc
gccctgtggggcgagaaggccgacctcgacgtgggacccggcgacgagatcgccctgggc
gacgtcgagattcaggacggctggcaggacgacctcgaggcctccgcgggctggcagtcg
acgattacggttctggactcggactccgcccctgaaacgggctcgagcggcggggccgac
gacgcggggaccgagaacaacgccggtctgtcggcctttgcggacgacggcgacgagagc
gacgagagcgacgagccgtctgcggacactgcagggacggaagctgatgatgacggttcc
gacgcgtccggcgagggcgatcccagcgacggcgaggaactcgagtttaccggcgtggtc
gtccaggccggcgaccccgtcgtcctggacgacggcgagacgacgatgagcgtcgccacc
gacgtcgacgtcggtctcggcgaggaggtcaccgcacgcggggtcgtccgcgacggccgt
ctcgaggcgaacgacgtgttctga
DBGET
integrated database retrieval system
