Natronobacterium lacisalsi: CHINAEXTREME04020
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Entry
CHINAEXTREME04020 CDS
T04669
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHINAEXTREME04020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hlc02000
]
CHINAEXTREME04020
Transporters [BR:
hlc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
CHINAEXTREME04020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
APW96987
UniProt:
A0A1P8LMH1
LinkDB
All DBs
Position
859582..861366
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AA seq
594 aa
AA seq
DB search
MMDGDELERRSFLKATGGAAGALALAGCVGEEPDDGSDEDEGAGTLNLVNGTMTSLDPIQ
STDTESGRVIRQMYEPLTHFPNGTTDVTNQLAEGYELSDDGLTYTFELKEGVQFHDGDEM
TADDFVYSFRRLAESPNSERGNFIVGSPTFLDVSAEFDDEGGVVPESLAVEAVDDYTLEI
TLETQAPSALEILSYDAFSVVPEGIVGDIEGYDGEIDHSEFSSSEPVGTGPFEFETWESD
AEAEVVRFDDYHGSVANVDAVHWQIIEDDEAQYTYAIEGNADIFELPTAQYESSLVDAET
DDRGREIGTYGPMENGETVDYVGAPQLSTYYFAFNVPSVPRPVRQAVAYVMNRETLIQTL
FEGRGQEAYTFTPSAMWPGGNDAYEDFIADYPYSRDEADRESAREVLEEAGYTEDDPYEL
TLTTYESDVFQEAGRELRDQLSGLGVELSLEQSPFATLQERGESGDLEFYSLGWTWSWPD
LGYGLFGFEPENTDTSVMPEETNGYYLDWHQADTDAVEKAQSAWERASSNPDPEDDDLRN
EAYIEMEEAVWDDAVCLPLYHELMELFYYDHVDIEPFGAMGEYFQVYNDVTLDE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatggatggagacgaactggaacgacgttcgttcctgaaggcaactggtggggctgct
ggtgcactagctctcgccgggtgcgttggtgaagagcccgacgatggtagtgacgaggac
gagggtgctggtaccctcaacctcgttaacggaacgatgacgtcgctcgacccgattcaa
tcgacggataccgagtcgggtcgcgtcattcgccagatgtacgaaccgctgacgcacttc
ccgaacgggacgactgacgtcacgaaccagctcgcggaagggtacgaactgtccgacgac
ggactgacctacaccttcgagctcaaagagggcgtccagttccacgacggcgacgaaatg
acggcggacgacttcgtctattcgttccgtcggctggccgaatccccgaacagcgaacgt
gggaacttcatcgtcgggtcgccgacgttcctcgacgtctcggccgagttcgacgacgag
ggcggcgtcgttcccgagagtctcgccgtcgaggccgtcgacgattacaccctcgagatc
acgctcgagacgcaggccccctctgcgctcgagattctctcgtacgacgcgttctcggtc
gttccggagggcatcgtcggcgatatcgaaggctacgacggcgaaatcgaccacagcgag
ttctcctcgagcgagccggtcggtaccggtcccttcgagttcgaaacctgggagtccgac
gccgaagcggaagtcgttcgcttcgacgattaccacggcagcgtcgccaacgtcgacgcc
gtccactggcagatcatcgaagacgacgaagcccagtacacctacgcgatcgagggcaac
gccgacatcttcgaactgccgaccgcgcagtacgaatccagcctggtcgacgcggagacc
gacgaccgcggccgtgaaatcgggacgtacggcccgatggagaacggcgagacggtcgat
tacgtcggcgcgccgcagctgagcacgtactacttcgcgttcaacgttccgtcggtcccg
cgtccggtccgacaggcggtcgcgtacgtcatgaaccgcgagaccctgatccaaaccctc
ttcgagggccgcggacaggaagcgtacacgttcaccccctcggccatgtggcccggcggc
aacgacgcctacgaggacttcatcgcggactacccctacagccgcgacgaggccgaccgc
gaatccgcacgggaagtcctcgaggaggcgggctacaccgaggacgacccctacgagctg
acgcttaccacctacgagtccgacgtcttccaggaagcgggccgcgagcttcgcgaccag
ctgtcgggcctgggcgtcgaactcagcctcgagcagtcgccgttcgcgaccctgcaggaa
cgcggtgagagcggcgacctcgagttctactcgctgggatggacctggagctggccggac
ctcggatacgggctcttcgggttcgagcccgagaacacggatacgtccgtcatgccggag
gagacgaacggatactatctcgactggcatcaggcggacaccgatgccgtcgagaaggca
cagagcgcctgggaacgtgcctcgtccaatccggatccggaagacgacgacctccgtaac
gaggcctacatcgaaatggaggaggccgtttgggatgacgcagtctgtctcccgctctat
cacgaactcatggaactgttctactacgatcacgtcgacatcgagcccttcggggcgatg
ggagagtacttccaggtgtataacgacgtgacgctggacgaataa
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