Natronobacterium lacisalsi: CHINAEXTREME05780
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Entry
CHINAEXTREME05780 CDS
T04669
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlc03016
]
CHINAEXTREME05780
Enzymes [BR:
hlc01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CHINAEXTREME05780
Transfer RNA biogenesis [BR:
hlc03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
CHINAEXTREME05780
BRITE hierarchy
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
APW97312
UniProt:
M0LP60
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All DBs
Position
complement(1222007..1223104)
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AA seq
365 aa
AA seq
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MELEGRFDEAAGVVTVGSDARQRYHDSRGYGYPLPDGDGSNQIALSPVEAAHLLYRGDLA
AVVHEETGERLDFQAFVAREPGDDFGVRFLVYADLRERGFYLSPAAEPWIDDPPAGPVDF
AVFPRGKGPGDGEIAYALRVIGERTDVPASDLAPGVLAVVDEESEITYFDVDRRAPTGGS
DSADALPDSPCEADLLEDRVVVWDPPVDLYERAFYGQPLEGREYDEPTLQCSLLEAAALA
EQGAIDLEPATVRRRGRDVEGERFDRRLAVYTALRDRGVVPKTGYKFGADFRTYADVESV
DDLGHSELLIRVHPADYVFEPRDLALDVRLAHGVRKTMVFALVDDEGTDADGADVEWWSL
ERLTP
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggaactcgaggggcggttcgacgaggccgcgggcgtcgtcaccgtggggagcgacgcg
cgccaacggtatcacgactcgcgggggtacggctaccccctgcccgacggggacgggagc
aaccagatcgccctctcgccggtcgaggcggcacacctcctctacaggggcgacctcgcg
gcggtcgtccacgaagagacgggcgaacggctcgacttccaggcgttcgtcgcccgcgaa
cccggcgacgacttcggcgtacgcttcctggtctacgccgacctccgcgaacgagggttt
tacctttcgcctgccgcggagccatggatcgacgacccgcccgccggcccggtcgacttc
gcggtcttcccccgcggcaagggccccggcgacggcgagatcgcctacgcgctgcgggtc
atcggcgagcgaaccgacgtgcccgcgagcgatctcgcgccgggcgtcctcgcggtcgtc
gacgaggagagcgagatcacgtacttcgacgtcgatcgccgggccccgaccggaggttcc
gactcggcggacgccctccccgacagtccctgcgaggccgacctgctcgaggaccgagtg
gtcgtctgggaccccccggtcgacctctacgagcgggcgttctacggccagccgctcgag
ggccgggagtacgacgaaccgaccctgcagtgttcgctgctcgaggcggccgccctcgcc
gagcagggtgcgatcgacctcgagccggcgacggtccgccggcggggacgggacgtcgag
ggcgagcggttcgaccgccggctggcggtctacacggcccttcgggaccgaggcgtcgtc
cccaagaccggctacaagttcggcgcggacttccggacctacgcggacgtggagtcggtc
gacgacctgggccactccgagttgctgatccgggttcatcccgccgactacgttttcgag
ccacgggacctggcgctggacgtccgactcgcccacggggttcgcaagacgatggtgttc
gcgctggtcgacgacgagggtaccgacgcggacggcgccgacgtcgagtggtggtcgctc
gagcggttgacgccgtaa
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