Halobiforma lacisalsi: CHINAEXTREME05785
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Entry
CHINAEXTREME05785 CDS
T04669
Name
(GenBank) DUF91 domain-containing protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hlc
Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hlc03032
]
CHINAEXTREME05785
03400 DNA repair and recombination proteins [BR:
hlc03400
]
CHINAEXTREME05785
Enzymes [BR:
hlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHINAEXTREME05785
DNA replication proteins [BR:
hlc03032
]
Prokaryotic type
DNA Topoisomerases
CHINAEXTREME05785
DNA repair and recombination proteins [BR:
hlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHINAEXTREME05785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NucS_N
zf-C4_Topoisom
Auto_anti-p27
zf-UBR
Motif
Other DBs
NCBI-ProteinID:
APW97313
UniProt:
M0LJW6
LinkDB
All DBs
Position
complement(1223167..1223940)
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AA seq
257 aa
AA seq
DB search
MIDDAIRVLAGDCTVIAEADDRQEYRGRMTTVVKPDNTVLVHDTDGYQPVAWLTRADSVS
SDRADGFTLVAKKDTQTLRIAAHDQDGFAHYPASVAGPVVGTCPDCGGALVRSNGVHCVD
CGDRYGVPADATIREDASNCDCGLPRMRVERGLAFDVCLDRDCESLDEAVSEAFDREWNC
PEPDCDGDLRILRRGGLIAGCEHYPDCDTGFAMPAGVIDGQCRCGLPTFDTGSGMRCLDA
TCDPIGERSPEEAAGDD
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacgcgatccgcgtcctcgcgggcgactgtaccgtgatcgccgaggccgac
gaccgccaggagtatcgcggccggatgacgacggtcgtcaagcccgacaacaccgtgctg
gtccacgacaccgacggctaccagcccgtcgcgtggctcacacgggccgacagcgtctcg
agcgaccgcgcggacggcttcaccctcgtcgcgaagaaggacacgcagacgctccggatc
gcggcccacgatcaggacgggttcgcccactaccccgcctcggtcgcgggcccggtcgtg
ggtacctgccccgactgcgggggcgcgctcgtccgctcgaacggcgtccactgcgtcgac
tgcggcgatcgctacggcgtgccagcggacgcgacgattcgggaggacgcgagcaactgc
gactgcgggctcccgcggatgcgcgtcgaacgggggctcgcgttcgacgtctgtctcgac
cgggactgcgagtccctggacgaggcggtctccgaagcgttcgaccgcgagtggaactgc
cccgagcccgactgtgacggtgacctccggatcctccgacgcggcgggctcatcgccggc
tgcgagcactaccccgattgcgacaccgggttcgcgatgcctgcaggggtgatcgacggc
cagtgtcgctgtggcctgccgaccttcgatacgggcagcgggatgcggtgtctcgacgcc
acctgcgatccgatcggggagcggtcgcccgaggaggcggccggggacgattga
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