Natronobacterium lacisalsi: CHINAEXTREME06465
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Entry
CHINAEXTREME06465 CDS
T04669
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlc03016
]
CHINAEXTREME06465
Enzymes [BR:
hlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CHINAEXTREME06465
Transfer RNA biogenesis [BR:
hlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHINAEXTREME06465
Prokaryotic type
CHINAEXTREME06465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
APX00023
UniProt:
A0A1P8LW69
LinkDB
All DBs
Position
1371857..1372810
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AA seq
317 aa
AA seq
DB search
MRAYRIAYDGTDYHGFQRQPSVPTVEGAIFAALRSLGVFDPDAADDSGPAVRPAGYAAAG
RTDKGVSAIAQTIAFEAPDWLTPRALNGELPADVRAWAVADAPDGFHATHHARRREYTYQ
LYAPPLEDDTDGSTPGGGSERRTPPIPPVAPADAARVSDERIQAACRALSGEHDYHNLAA
DDDPDRTERSLTVEATRDGDYLVCTVEADGFARQLVRRLVSLVREIGAGDSPLEKVDRVL
ADEPLPGPEGVGPAPPEPLVLTGVEYPDPLEFRVDPVAAESARDVFGARSVERETGARVA
GQLAAGVDAPDVDSSLE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctaccggatcgcctacgatggcaccgattatcacgggttccagcgccagccc
tcggtcccgaccgtcgagggagcgatcttcgccgcgttgcgctcgctcggggtgttcgat
ccggacgccgccgacgacagcggtcccgcggtcagacccgccggctatgccgccgccggc
cggaccgacaaaggtgtctcagcgatcgcgcagacgatcgctttcgaggccccagactgg
ctcactccgcgggcgctgaacggggagctgcccgccgacgtccgcgcgtgggccgtcgcc
gacgcgcccgacgggttccacgcaacccaccatgcccggaggcgggagtacacctaccag
ctgtacgcgccgccgctcgaggacgacaccgacggttcgactccgggtggcggctccgaa
cggcggaccccgccgatcccgcccgtcgcgcccgccgacgcggctcgcgtctccgacgag
cggatccaggccgcctgtcgtgcgctctccggtgaacacgactaccacaatctcgccgcc
gacgacgatccggaccgtaccgaacggtcgctgaccgtcgaggcgacccgcgacggggac
tatctcgtctgtacggtcgaggcggacggcttcgcccggcaactggtccggcgactcgtc
tcgctcgtccgcgagatcggagccggcgactcgcccctcgagaaggtcgatcgcgtcctc
gcggacgagccccttcccggccccgagggggtcggtcccgcgccgccggaaccgctcgtg
ctcaccggcgtcgaataccccgatccactcgagttccgggtcgacccggtcgcggccgag
agcgctcgcgacgtcttcggcgcgcggtcggtcgaacgggagactggcgcgcgggtcgcg
gggcaactggcggccggggtcgacgccccggacgtggattcctccctcgagtga
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integrated database retrieval system
