Natronobacterium lacisalsi: CHINAEXTREME08540
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Entry
CHINAEXTREME08540 CDS
T04669
Name
(GenBank) rhodopsin
KO
K04643
sensory rhodopsin
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hlc04030
]
CHINAEXTREME08540
G protein-coupled receptors [BR:
hlc04030
]
Others
Others
Bacterial rhodopsin
CHINAEXTREME08540
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhodopsin
CRPA
Motif
Other DBs
NCBI-ProteinID:
APW97823
UniProt:
M0LW98
LinkDB
All DBs
Position
complement(1789545..1790306)
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AA seq
253 aa
AA seq
DB search
MISHATIYLVSSALLGLGAVGLLVATRRLEPSIRRYGYATVLACGAMSVTYLLMRAEIGT
VTTNEESVVRFVGYTVAWAGISYVLGAVADAGPKRTVAVFACSMGTLWATFASWILSGTA
GSIASLVIVASFVGLVSLLVGPVAQSAAGVDERRTLLYRKLEYLVLLAWAGLIVLGIVSE
QNLALTDSFVGQIGATYVDLVLLLGFGGLVLRNVAALEKTAASTTVFPFFGGGSGGDGDE
SETANRNPGEAAD
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtgatctcacacgcgacgatctacctcgtctcgagtgcactgctcggcctcggcgcggtc
ggcctgctggttgcgacgcgacgcctcgagccgtcgatccgccggtacggctacgcgacc
gtgctcgcctgcggagccatgagcgtgacctacctgctcatgcgggcggagatcggtacc
gtcaccacgaacgaagaatcggtcgtcaggttcgtcggctacacggttgcctgggcgggg
atcagctacgtactcggggccgtcgccgacgcggggccgaaacgaacggtcgccgtcttc
gcgtgtagcatgggcaccctctgggccacgttcgcgagctggatcctgagcgggacggcg
gggtcgatcgcctcgctggtgatcgtcgcctcgttcgtcggcctcgtttccctgctcgtc
ggcccagtcgcgcagtcggccgcgggcgtcgacgagcgccggacgctgctctaccggaaa
ctcgagtacctcgtgttgctcgcctgggcggggctgatcgtcctcggcatcgtctcggag
cagaacctcgcgctgaccgacagtttcgtcgggcaaatcggcgcgacgtacgtcgacctg
gtgctgttgctcgggttcggcggactcgtgctccggaacgtcgccgcgctcgagaagacc
gcggcttcgacgacggtgttcccgttcttcggtggcggaagcggcggggatggtgacgaa
tccgagaccgccaacaggaacccgggcgaagcggccgactga
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