Natronobacterium lacisalsi: CHINAEXTREME11110
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Entry
CHINAEXTREME11110 CDS
T04669
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CHINAEXTREME11110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlc03019
]
CHINAEXTREME11110
03009 Ribosome biogenesis [BR:
hlc03009
]
CHINAEXTREME11110
04131 Membrane trafficking [BR:
hlc04131
]
CHINAEXTREME11110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlc04147
]
CHINAEXTREME11110
Messenger RNA biogenesis [BR:
hlc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
CHINAEXTREME11110
Ribosome biogenesis [BR:
hlc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
CHINAEXTREME11110
Membrane trafficking [BR:
hlc04131
]
SNARE
SNARE associated proteins
Others
CHINAEXTREME11110
Autophagy
Aggrephagy
Other aggrephagy associated proteins
CHINAEXTREME11110
Exosome [BR:
hlc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHINAEXTREME11110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
TIP49
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
nSTAND3
RNA_helicase
AAA_28
AAA_7
AAA_25
Mg_chelatase
IstB_IS21
AAA_3
ABC_tran
DUF815
NB-ARC
TsaE
AAA_24
AAA_18
AAA_30
AAA_17
ATPase
Sigma54_activat
AAA_11
ATPase_2
Parvo_NS1
Zeta_toxin
PhoH
SLFN-g3_helicase
AAA_lid_PRS2_C
bpMoxR
Bac_DnaA
Vps4_C
HJURP_C
Zot
Motif
Other DBs
NCBI-ProteinID:
APW98307
UniProt:
M0L498
LinkDB
All DBs
Position
2312503..2314770
Genome browser
AA seq
755 aa
AA seq
DB search
MKLTVKPLKQKDAGRGLAAIDRVSMRELDLENGDYVVIDGGGDGQAVARVWPGYPEDEGR
GIVRIDGRLRQEADVGIDDSVTVEPADVKPAKSVTVALPQNLRIRGDIGPLVRDKLSGQA
VTEGQTVPFSLSFGPMASSGQSVPLKIASTSPSGTVVITDSTSIEISETPAEQVSAGGAG
ASPEGVPEVTYEDIGGLDDELDQVREMIELPMRHPELFQQLGIEPPKGVLLHGPPGTGKT
LMAKAVANEIDAHFETISGPEIMSKYYGESEEQLREVFEEAEENAPAIIFIDELDSIAAK
REEAGGDVERRVVAQLLSLMDGLEERGRVTVIAATNRIDDIDPALRRGGRFDREIEIGVP
DKEGRKEILQVHTRGMPLEEDVDLEHYAANTHGFVGADLESLAREGAMNALRRIRPDLDL
ESEEIDADVLESLQVTEDDFKEALKGIQPSAMREVFVEVPDITWNDVGGLEDTKERLRET
IQWPLDYPEVFEQMDMEAAKGVLMYGPPGTGKTLLAKAVANEAESNFISIKGPELLNKYV
GESEKGVREVFEKARSNAPTVIFFDEIDSIAGERGQRQADSGVGERVVSQLLTELDGLEE
LEDVVVIATTNRPDLIDSALLRPGRLDRHVHVPVPDEEGRKKIFEVHTRDKPLADAVDLD
WLAAETEGYVGADIEAVCREASMAASREFINSVDPEEMADTVGNVRISKEHFEHALEEVN
PSVTPETRERYEEIEEEFDTAEPAQEEDQLGRTFQ
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaccgttaaaccactgaaacagaaggacgcaggccgcggactggccgcgatc
gaccgcgtctcgatgcgcgagctcgatctcgagaacggcgactacgtcgtgatcgacggg
ggaggcgacggccaggccgtcgcccgcgtttggccggggtatcccgaagacgagggccgc
gggatcgtccgcatcgacggccgtctccgccaggaggccgacgtcggcatcgacgacagc
gtcaccgtcgaaccggcggacgtcaaacccgcgaagtcggtcacggttgcgctcccccag
aacctccgtatccgcggggacatcggcccgctcgtccgtgacaagctctcgggccaggcc
gtcacggagggccagacggtcccgttctcgctgtcgttcggcccgatggccagctccggc
cagtcggtgccgctgaagatcgcgagtacctcgccgtccggcaccgtggtcatcacggac
tcgacgagcatcgagatctccgagacgccggccgagcaggtcagcgccggcggcgcgggc
gcgtcgccggagggcgtcccggaagtcacctacgaggacatcggcggcctggacgacgaa
ctcgaccaggtccgcgagatgatcgagttgccgatgcgccaccccgagctgttccagcag
ctcggcatcgagccgccaaagggcgtcctcctgcacggcccgccgggcaccgggaagacg
ctcatggccaaggccgtcgccaacgagatcgacgcccacttcgagacgatctccggcccg
gagatcatgtcgaagtactacggcgagagcgaggagcaactccgcgaggtcttcgaagag
gccgaggagaacgcccccgcgatcatcttcatcgacgaactcgactccatcgccgccaag
cgtgaggaagccggcggcgacgtcgaacgtcgcgtggtcgcgcaactgctctcgctgatg
gacggcctcgaggaacgcggccgcgtcacggttatcgccgcgacgaaccgcatcgacgac
atcgatcccgcgctccgcaggggcggtcggttcgaccgcgagatcgagatcggcgttccg
gacaaggaaggccgcaaggagatcctgcaggtccacacccgcgggatgcccctggaggag
gacgtcgacctcgagcactacgccgcgaacacccacgggttcgtcggcgccgacctcgag
agtctcgctcgcgagggggcgatgaacgccctccggcgcattcgtccggacctcgacctc
gagagcgaggagatcgacgccgacgtcctcgagtccctgcaggtcaccgaggacgacttc
aaggaggcgctcaagggcatccagccatccgcgatgcgcgaagtcttcgtcgaggttccc
gacatcacctggaacgacgtcggcggcctcgaggacaccaaagagcgactccgcgagacg
atccagtggccgctcgactaccccgaggtcttcgagcagatggacatggaggccgccaag
ggcgtcctcatgtacggaccccccgggacggggaagaccctgctcgcgaaggcggtcgcc
aacgaggcggagtctaacttcatctcgatcaaaggccccgaactgctgaacaagtacgtc
ggggaatccgagaagggcgtccgcgaggtcttcgagaaggcccgctcgaacgccccgacc
gtgatcttcttcgacgagatcgactccatcgcgggcgaacgcggccagcgccaggccgac
tccggcgtcggtgaacgggtcgtctcgcaactcctgaccgagctggacggcctcgaggaa
ctcgaggacgtcgtcgtcatcgcgacgacgaaccggccggacctgatcgacagcgcgctc
ctgcgtccgggccggctggatcgccacgtccacgtccccgtccccgacgaggagggccgg
aagaagatcttcgaggtccacacccgggacaagccgctcgcggatgcggtcgacctcgac
tggctggccgcggagaccgagggctacgtcggcgccgacatcgaagcggtctgtcgcgag
gcatcgatggccgccagccgcgagttcatcaactcggtcgaccccgaggagatggccgac
accgtcggaaacgtccgtatcagcaaggaacacttcgagcacgccctcgaggaggtcaac
ccgagcgtgacccccgagacgcgcgagcgctacgaggagatcgaagaggagttcgatacg
gccgaaccggcccaggaagaggatcagctcggccggacgttccagtaa
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