Halobiforma lacisalsi: CHINAEXTREME12715
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Entry
CHINAEXTREME12715 CDS
T04669
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hlc
Halobiforma lacisalsi
Pathway
hlc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHINAEXTREME12715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlc03400
]
CHINAEXTREME12715
Enzymes [BR:
hlc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CHINAEXTREME12715
DNA repair and recombination proteins [BR:
hlc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHINAEXTREME12715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
APW98585
UniProt:
M0LJ29
LinkDB
All DBs
Position
2635004..2635642
Genome browser
AA seq
212 aa
AA seq
DB search
MKNVTDRTSNPFGLRPPCDRAPEEGRDAVFGYGDANGDFHVIGDHPGVHGGKRTGVPFTG
TDAGRAVQDVFREAGFVTGPADDPDCENLYCSYLHMCCLPNGHEPTGREYDDLERYFDAE
LRAINAHILLPVGETVTDHVLRAYTTQRRRFDHDLDMADLHARELRGRGFMVVPIRNPDE
WAAGDREEIVSTLESILESDYRQTKGVATRVG
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaacgtcaccgacaggacgagcaatccgttcggtctccgcccgccctgcgaccgc
gctcccgaggagggacgcgacgccgtcttcgggtacggtgacgccaacggcgacttccac
gtcatcggcgaccacccgggcgtccacggcgggaagcgtaccggcgtcccgttcaccgga
accgacgccggacgggccgttcaggacgtcttccgcgaggccgggttcgtgaccggcccg
gcggacgaccccgactgcgagaacctctactgcagttatctccacatgtgctgtctcccc
aacggccacgagccgaccgggcgggagtacgacgacctcgagcggtacttcgacgccgag
ttgcgcgcgatcaacgcgcacatcctgcttcccgtcggcgagacggtgaccgatcacgtc
ctccgggcgtacacgacacagcgccggcggttcgaccacgatctggacatggccgacctc
cacgcccgcgaactccgcggtcgcggcttcatggtcgtcccgatccggaaccccgacgag
tgggcggccggcgatcgggaggaaatcgtttcgacgctcgagtcgatcctcgagagcgat
taccgacagacgaagggcgtggcgacgcgggtcggctaa
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