Halobiforma lacisalsi: CHINAEXTREME13060
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Entry
CHINAEXTREME13060 CDS
T04669
Name
(GenBank) rhodopsin
KO
K04643
sensory rhodopsin
Organism
hlc
Halobiforma lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hlc04030
]
CHINAEXTREME13060
G protein-coupled receptors [BR:
hlc04030
]
Others
Others
Bacterial rhodopsin
CHINAEXTREME13060
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhodopsin
MIG-14_Wnt-bd
Motif
Other DBs
NCBI-ProteinID:
APW98649
UniProt:
M0LHI0
LinkDB
All DBs
Position
complement(2703277..2704014)
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AA seq
245 aa
AA seq
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MIPESTVYVLSGGALGTLALLFAVWTARLPSAVRRYGLAVVVGTASMTVAYFLMSAGVLT
VQTTGREQSAARFLGYTGTWTAFAYLLAAVAGAGRRIAAILLAAILWVQWATLVSWVVGG
TAELFVSVSMLAALALVVYLLFVPFTRRAGETTGERFLLFSKLKYLTVLGWAGLVTVAIV
SEQNLALVDMFVGQVAATYIDVVLLAGLGGIVLRHVDALEATAAGTDAPRDVSSGDLGHD
ANPVD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
gtgatcccggaatcgacagtctacgtcctctcgggaggtgcgctgggcacacttgcgctc
ctgtttgccgtctggacggcgcggctcccgtcggccgtccgacggtacgggttggcggtc
gtggtggggactgcgagcatgactgtcgcgtacttcctcatgtcggcaggggttctcact
gtccagacgacggggcgggagcaatccgctgcacggtttctcggctacaccgggacgtgg
acggcgtttgcgtacctgctcgcagccgtcgccggcgctggacgacggattgcggcgata
ctgctcgcggctatcctgtgggtccagtgggcgacgctcgtctcctgggtcgtcggcggt
accgcggaactgttcgtttcggtgagcatgctcgctgcgctcgcgctcgtcgtctacctg
cttttcgtcccgttcacgcgacgagcgggggaaacgaccggcgaacggttcctcctcttc
tcgaagctcaagtacctgaccgtcctcggctgggccgggctggtgacggtcgcgatcgtc
tccgaacagaacctggcgctggtcgatatgttcgtcgggcaggtcgcggcgacctacatc
gacgtcgtcctgctcgcgggtctggggggcatcgtcctgcgccacgtcgacgcgctcgag
gcgacggccgccgggaccgacgccccacgtgacgtctcgagcggggacctcggtcacgac
gcaaatcccgtggactga
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