Natronobacterium lacisalsi: CHINAEXTREME14125
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Entry
CHINAEXTREME14125 CDS
T04669
Name
(GenBank) transcription initiation factor IIB 2
KO
K03124
transcription initiation factor TFIIB
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHINAEXTREME14125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlc03021
]
CHINAEXTREME14125
Transcription machinery [BR:
hlc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CHINAEXTREME14125
Prokaryotic type
Archaeal type
TFB
CHINAEXTREME14125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_C
Cas12f1-like_TNB
DZR_2
DZR
Trm112p
Syntaphilin
Zn_ribbon_IS1595
Siva
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
APW98850
UniProt:
M0LFI7
LinkDB
All DBs
Position
2904417..2905400
Genome browser
AA seq
327 aa
AA seq
DB search
MSNVSVNSVETDRSKSTEQSRAQSERTVCPECSGRLRHDVSHGEHVCVECGLVVDADEID
HGPEWRSFDDEGDARTRVGAPITERRHDKGLSTTIGWEDRDAYGNDLSASKRTRLRRLRT
WNERFTSKDARERNLKHAFGELERMASALGLPDPCRETAAVIYRRAVEEDLLPGRSIEAM
ATASLYAAARQHGTPRTFVAFDSVSRVDDQPVKRAYRYLSGELDLEIAPPDPEQYLRPFA
SDLGVTDETERLAREILEAAKAAELHIGKSPAGIAAAAIYAAGRLTNDRVTQETIDETTG
VSKFTIRNRYQELLEAYGIYEETEHDR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgtgagcgtcaactcggtcgaaacggaccggtcgaagagcaccgagcaaagc
agggcgcagtcggaacgcacagtctgccccgagtgctcgggacggctccgccacgacgtc
agccacggcgaacacgtctgtgtcgagtgcgggctcgtggtcgacgcagacgagatcgat
cacggaccggagtggcgctccttcgacgacgagggcgacgcccggacccgggtcggcgca
ccgatcaccgagcggagacacgacaagggactgagcacgacgatcggctgggaggacagg
gacgcctacgggaacgacctctccgcgagcaagcggacgcgactgcgtcggctccggacc
tggaacgagcggttcacctcgaaagacgctcgcgagcggaacctgaaacacgccttcggc
gaactcgagcggatggcgtccgcgcttggccttcccgacccgtgtcgcgagaccgccgcg
gtgatctaccggcgggccgtcgaggaggacctgctccctggtcgctcgatcgaggcgatg
gcgaccgccagcctctacgccgccgcgcgccagcacggaaccccgcgaacgttcgtcgcc
ttcgactcggtgagccgcgtcgacgaccaacccgtgaaacgcgcgtaccggtacctctcg
ggcgaactcgacctcgagatcgccccgccggatcccgaacagtacctccggccgttcgcg
tccgacctcggggtgaccgacgagaccgaacgcctcgcccgagagatcctcgaggcggcg
aaagccgccgaactccacatcggcaagagcccggccgggatcgcggcggcggccatctac
gcggccggtcgcctgacgaacgaccgcgtcacccaggagacgatcgacgagacgaccggc
gtcagcaagttcacgatccgaaaccggtaccaggagttgctcgaggcctacgggatctac
gaggaaacggaacacgatcgctga
DBGET
integrated database retrieval system
