Natronobacterium lacisalsi: CHINAEXTREME15585
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Entry
CHINAEXTREME15585 CDS
T04669
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlc03016
]
CHINAEXTREME15585
Enzymes [BR:
hlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHINAEXTREME15585
Transfer RNA biogenesis [BR:
hlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHINAEXTREME15585
Prokaryotic type
CHINAEXTREME15585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Pus10_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
APW99109
UniProt:
M0LFM0
LinkDB
All DBs
Position
3209528..3210442
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AA seq
304 aa
AA seq
DB search
MTRDLRDPPDERSPADLLTFGVVNLDKPPGPSSHQVSGWLRDAVDETLADRGLEASIDRA
AHAGTLDPKVTGCLPVMLGDATRLAQVFLEGPKEYVAVLECHGSVPADTESIVAEFEGPI
YQKPPRKSAVARRLRVRELYKLEVLEAEDRRLLLRIECESGTYIRKLCHDLGLALGTGAH
MGDLRRTATSPFDDRDLHSAQEFLDALAFWVEDDDPEPLYEIVDPAERILEGIPGVSIAP
SAAREVAEGAPVYAPGVIEVDDGIESGELVACYTPDGAAVCLGEFVGPADAGSGVVVDLE
RVLV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgacctccgcgacccacccgacgagcgctcgcccgcggacctgctgacgttc
ggcgtcgtcaacctcgacaaacccccggggccgtcctcccaccaggtgagcggctggctg
cgggacgccgtcgacgagacgctcgcggatcgcgggctcgaggcgtcgatcgatcgggcc
gcccacgccgggacgctcgatcccaaggtcacgggctgtctgccggtcatgctcggcgac
gcgacccgtctcgcacaggtcttcctcgagggcccaaaggagtacgtcgccgtcctcgag
tgtcacgggtcggtgccggccgacaccgagtcgatcgtcgcggagttcgagggaccgatc
taccagaagccgccgcgcaagagcgcagtcgcccgccgtctgcgcgtacgcgaactgtac
aagctcgaggtgctcgaggccgaggaccgccggctcctgctccgaatcgagtgcgagagc
gggacctacatccgcaaactctgtcacgacctggggctggcgctgggaacgggggctcac
atgggagatctgcggcggacggcaacgtcgccgttcgacgatcgcgacctccactcggcc
caggagttcctcgacgcgctggcgttctgggtcgaggacgacgaccccgaacccttgtac
gaaatcgtcgacccagccgagcgcatcctcgaggggattcccggggtttcgatcgcgccg
agcgcggcccgcgaggtcgccgagggtgcgccggtctacgcgcccggtgtcatcgaagtc
gacgacggcatcgagtccggcgaactggtcgcctgttacacgcccgacggcgcggcggtc
tgtctcggcgagttcgtcggcccggcagacgcggggtcgggcgtcgtcgtcgacctcgag
cgggttctggtctga
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