Natronobacterium lacisalsi: CHINAEXTREME16220
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Entry
CHINAEXTREME16220 CDS
T04669
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc00260
Glycine, serine and threonine metabolism
hlc00460
Cyanoamino acid metabolism
hlc00630
Glyoxylate and dicarboxylate metabolism
hlc00670
One carbon pool by folate
hlc00680
Methane metabolism
hlc01100
Metabolic pathways
hlc01110
Biosynthesis of secondary metabolites
hlc01120
Microbial metabolism in diverse environments
hlc01200
Carbon metabolism
hlc01230
Biosynthesis of amino acids
hlc01240
Biosynthesis of cofactors
hlc04981
Folate transport and metabolism
Module
hlc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CHINAEXTREME16220
09102 Energy metabolism
00680 Methane metabolism
CHINAEXTREME16220
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CHINAEXTREME16220
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CHINAEXTREME16220
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CHINAEXTREME16220
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CHINAEXTREME16220
Enzymes [BR:
hlc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CHINAEXTREME16220
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF7620
Motif
Other DBs
NCBI-ProteinID:
APW99221
UniProt:
M0LCD9
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All DBs
Position
3337561..3338808
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AA seq
415 aa
AA seq
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MDHEHVREVDPAVADALENEVDRQRSTLQMIASENHVSPAVLDAQGSALTNKYAEGYPGS
RYYGGCEYADEVEELAIERATELFGAEHVNVQPHSGTQANQAVYFAMLEPGDRILSLDLT
HGGHLSHGHPANFTGQLYEVEQYEVDPETGYIDYEGLSDLAEEFEPDIVVSGYSAYPREI
DWERIQAVADDVDAYHLADIAHITGLVAAGVHDSPVGIADFVTGSTHKTIRSGRGGIVMC
DEEYADDVDSAVFPGGQGGPLMHNVAGKAVGFKEALEPEFEEYAEQVVANAKALGESLSE
NGFSLVSDGTDNHLVLVDLRESHPDTSGGDAEEALEEAGIVLNANTVPGETRSAFDPSGI
RAGTPALTTRGFDEADCREVGDLITRVIDAPEDETVLAEVREEVDRLCEENPLYE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaccacgagcacgtccgggaggtcgatcctgccgttgccgatgcgctcgagaacgag
gtagaccgtcagcggtcgacgttgcagatgatcgcgagcgagaaccacgtcagccccgcg
gttctcgacgcccaggggagcgccctgacgaacaaatacgcggaggggtatcccggctcg
cggtactacggcggctgcgagtacgccgacgaggtcgaggagctcgcgatcgaacgggcg
accgaactgttcggcgccgagcacgtcaacgtccagccccactcgggaacccaggccaac
caggcagtctacttcgcgatgctcgagcccggcgacaggatcctctcgctggacctgacc
cacgggggccacctcagccacggccaccccgccaacttcaccgggcagctctacgaggtc
gagcagtacgaggtcgatcccgagacgggctacatcgactacgaggggctttccgacctc
gccgaggagttcgagccggacatcgtcgtctcggggtactccgcgtacccgcgcgagatc
gactgggagcgcatccaggcggtcgccgacgacgtcgacgcctaccacctcgcggacatc
gcccacatcacgggcctggtcgccgccggcgtccacgactcgccggtcggcattgcggac
ttcgtcaccggttcgacccacaagaccatccgctcgggccggggcggcatcgtgatgtgc
gacgaggagtacgcggacgacgtcgactccgccgtcttccccggcggccagggcggcccg
ctcatgcacaacgtcgccggcaaggccgtcggcttcaaggaagccctcgagcccgagttc
gaggagtacgcggaacaggtcgtcgccaacgcgaaggcgcttggcgagtcgctgtccgag
aacgggttctcgctggtctcggacggcaccgacaaccacctcgtgctcgtggatctgcgc
gagagccatcccgacacctccggcggcgacgccgaggaggcgctcgaggaggccggaatc
gtcctcaacgccaacaccgtccccggcgagacccggtctgcgttcgacccctcggggatc
cgcgcgggcacgcctgcgctgaccacgcgcggcttcgacgaggcggactgtcgcgaggtc
ggcgacctgatcactcgcgtaatcgacgcccccgaggacgagaccgttctcgccgaggtc
cgcgaggaggtcgaccgactctgcgaggagaacccgctctacgagtaa
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