Natronobacterium lacisalsi: CHINAEXTREME17005
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Entry
CHINAEXTREME17005 CDS
T04669
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hlc03016
]
CHINAEXTREME17005
Enzymes [BR:
hlc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CHINAEXTREME17005
Transfer RNA biogenesis [BR:
hlc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHINAEXTREME17005
Prokaryotic type
CHINAEXTREME17005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
APX00127
UniProt:
M0LSW0
LinkDB
All DBs
Position
3519922..3521268
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AA seq
448 aa
AA seq
DB search
MRPAHPTEQAVGLEYYVSDTDGVGGRLREDDDQFRVWELERFSTEPVDADVDAYPHLVFR
ATLRGWDTNDFAARLSDALGTSRERVDWAGTKDKYAVTTQLFSVYGADPDDLPEIDGVEI
EVLGRAGRGLEFGDLAGNAFEVVVSDPAEPDNADEITDELHAFGGRDDEPREIGVPNFFG
QQRFGSRRPITHEVGLEVVRGDWEGAVMAYLGRPTEAEPEGTQEARTFLEETRDWAEALD
RFPNRLRYERSMLHELAECDGEPGPDEFRAALERVPSNLQRLFVHAAQSYAFNLMLSRRL
ERGLPFDRPVAGDVVCFADTGGDVPEEILLPDTDRLQRVDERRVDSVTRHCERGRAFVTA
PLVGTETELADGEQGEIERAVLEDLDLAPGDFDLPGEFYSSGTRRTILLRTALEVDRDPL
ALSFALPKGSYATVVAREFLKVDPIDLG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccggcacaccctacggagcaagccgtcggcctcgagtactacgtcagcgacacc
gacggcgtcggcggccgccttcgcgaggacgacgaccagttccgggtctgggaactcgag
cggttctcgaccgaacccgtcgacgcggacgtcgacgcctaccctcacctcgtcttccgg
gcgacgctgcggggctgggacaccaacgacttcgcggcgcggctctccgacgccctggga
acctcccgcgaacgtgtcgactgggccggcacgaaggacaagtacgccgtgaccacccag
ctcttttccgtctacggcgcagacccggacgacctccccgagatcgacggcgtcgagatc
gaggtactcggccgggcgggacggggcctcgagttcggcgacctcgcaggtaacgccttc
gaggtcgtcgtcagcgaccccgccgaacccgacaacgccgacgagatcaccgacgagtta
cacgcgttcggcggccgtgacgacgagccccgtgagatcggcgtccccaacttcttcggc
cagcagcggttcggcagtcgccgcccgatcactcacgaggtcggcctcgaggtcgtccgc
ggcgactgggagggtgcggtgatggcgtacctcggccggccgaccgaggccgaacccgag
ggaacccaggaggcccggacgttcctcgaggagacccgcgactgggcggaagccctcgat
cgcttcccgaaccgcctgcgatacgagcggtcgatgctccacgaactcgccgagtgcgac
ggcgaacccggacccgacgagttccgggccgccctcgagcgggtcccgtcgaacctccag
cggctgttcgtccacgccgcccagtcgtacgcgttcaacctgatgctgagccgacggctc
gagcgcggtctcccgttcgaccgccccgtcgccggcgacgtggtctgtttcgccgacacc
ggcggcgacgtccccgaggagatcctcctgcctgacaccgacaggctccagcgcgtcgac
gagcgccgcgtcgactctgtgacccgccactgcgagcgcggccgcgcgttcgtcaccgcg
ccgctggtcggcaccgagaccgaactcgccgacggcgagcagggcgagatcgaacgagcg
gtgctcgaagacctcgacctcgcgcccggcgacttcgacctcccaggcgagttctactcg
agcggcacccggcgtacgatcctccttcggaccgccctcgaggtcgaccgggacccgctc
gcgctgtcgttcgcgcttccgaaggggtcgtacgcgacggtcgtggcgcgggagttcctc
aaggtcgatccgatcgatctcggctga
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