KEGG   Natronobacterium lacisalsi: CHINAEXTREME17955
Entry
CHINAEXTREME17955 CDS       T04669                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
hlc  Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:hlc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hlc03400]
    CHINAEXTREME17955
Enzymes [BR:hlc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CHINAEXTREME17955
    5.6.2.6  RNA 3'-5' helicase
     CHINAEXTREME17955
DNA repair and recombination proteins [BR:hlc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    CHINAEXTREME17955
SSDB
Motif
Pfam: DEAD_assoc DEAD Helicase_C WH_Lhr ResIII HypA Zn_ribbon_8 Zn_ribbon_PaaD
Other DBs
NCBI-ProteinID: APW99537
UniProt: M0LEX9
LinkDB
Position
3693204..3696113
AA seq 969 aa
MTDGDVAAFTRLGSTVRGALSERGFSTPTAPQQVAIPPLAAGQNTLVIAPTGSGKTETAM
LPVFDDLVAGEGEGEGESEPRTARRPSSAETPDGGPPEGFGALYITPLRALNRDMLERLE
WWGDYLDLEVDVRHGDTTDYQRSKQAEDPPDVLITTPETLQAMLTGERLREALQDVSHVV
IDEVHELAASKRGAQLAIGLERLRDLAGEMQRIGLSATVGDPDEVAGFLTGGRPCEIREI
DVGSNVDVDVRKPEITEEDEELAGKLMTEPDTASHVRLIRDLVAEHESTLIFVNTRQTAE
AVGSRFKELDLPIGVHHGSLSKEARIDVEDRFKSGELDGLLCTSSMELGIDVGSVDHVIQ
YKSPRQVTRLLQRIGRAGHRQDEVSRGTIVTTRPDDTFEALSIARRAREGEVEPAAIHEG
SLDVVANQVPGIVQSRGDTHLREAYDTVSRAYPFRNLREETFREVVSELDRNRIVWFDEG
EDRIETTGGTWQYVYANLSMIPDEETYEVHDIASGGQIGTLDERFVVNFAEPGEVFVQRG
EMWRISEIDDEEGRVKVSPIEDPAGEVPSWIGQEIPVPAAVAGEVGEIREVARPQFEAGA
DATAVGRELSNRYPADEYTLGEACEQLERQVESESPMPTAKRLVLERQGRTIVLNAPFGH
TANETLGRVLSSLLGQRAGSSVGLETDPYRIELEVPTSIATSDVLEVLEGTDPDHVETIV
ELGLKNSDALAFRLAQVSAKFGALKRWQGQGSGRISNERLLAALEDTPMYEEAIREVFHE
DLDAERASAVLEGIQSGEIDLVTHRGRTPVGQGGRSSGGKELLAPENADASVIETVRERL
QNDRVILLCTHCKDWKVKTKVKRVRDQPECPECGSTRIASLNPWADEVVQAVRAEEKDEE
QEKMTERAYRAASLVQSHGKQAVIAMAARGVGPHNAAQIINKLREDESAFYRDILSKERE
YARTQSFWD
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgacagacggggacgtcgcggcctttacacgcctcggatcgacggtccgcggtgcgctc
tccgaacgcggattctccacgccgacggcaccacaacaggtggcgattccgccgcttgcc
gccgggcagaacaccctcgtgatcgcgcccaccgggagcggcaagaccgagacggcgatg
ttgcccgtcttcgatgatctcgtcgccggcgagggcgagggcgagggcgagagtgagccg
aggacggcgaggcgaccctcgtcggcggaaacccccgacggtgggccacccgaggggttc
ggcgcgctctacatcaccccgctgcgggcgttgaaccgcgacatgctcgagcgcctcgag
tggtggggcgactacctcgacctcgaggtcgacgtccgccacggggacaccaccgactac
cagcggagcaagcaggccgaggacccgccggacgtcctgatcacgacccccgagacgctg
caggcgatgttgacgggcgaacgcctgcgggaggccctgcaggacgtctcccacgtcgtg
atcgacgaggttcacgaactcgcggcctcgaaacgcggcgcccagcttgcgatcggcctc
gagcgtctgcgggacctcgcgggcgagatgcagcgtatcggactctcggcgacggtcggc
gaccccgatgaggtggccgggttcctcaccggcggtcggccctgcgagatccgcgagatc
gacgtcgggagcaacgtcgacgtcgacgtccgcaagcccgaaatcaccgaagaggacgag
gaactcgccgggaaactgatgaccgaacccgacacggcgagtcacgtccggctgatccgc
gatctcgtcgcggaacacgagtcgacgctgatcttcgtcaacacccgccagacggcggag
gcggtgggctcgcggttcaaagaactcgacctgccgatcggcgtccaccacggctcgctc
tcgaaggaggcccggatcgacgtcgaggaccggttcaagtcgggcgaactggacggcctg
ctctgtacctcgtcgatggaactggggatcgacgtcggcagcgtcgatcacgtcatccag
tacaagagcccccgtcaggttacccggctgctccagcggatcgggcgcgccggccaccgc
caggacgaggtctcgcgcgggaccatcgtcacgacccggccggacgacaccttcgaggcg
ctctcgatcgcgcgccgcgcccgcgagggcgaggtcgaaccggcggcgatccacgagggc
agcctcgacgtcgtcgcgaaccaggtgccggggatcgtccagagtcgcggggacacgcac
ctccgggaggcctacgataccgtctcccgggcgtacccgttccggaacctccgcgaggag
acattccgggaagtggtctccgaactcgaccgcaaccggatcgtctggttcgacgagggc
gaagatcggatcgagacgaccggcggcacctggcagtacgtctacgccaacctctcgatg
atccccgacgaggagacctacgaggtccacgacatcgcctccgggggacagatcgggacc
ctcgacgagcggttcgtcgtcaacttcgccgaacccggcgaggtcttcgtccagcgcggg
gagatgtggcgcatcagcgagatcgacgacgaggagggccgggtgaaggtcagcccgatc
gaggaccccgccggcgaggtcccctcctggatcggccaggagatccccgtccccgccgcc
gtcgcgggcgaggtcggtgagatccgcgaggtcgcgcgcccccagttcgaggcgggcgcg
gacgcgacggccgtcggccgcgaactgtcgaaccgatacccggccgacgagtacaccctc
ggcgaggcctgcgaacaactcgagcgtcaggtcgaaagcgagtcgccgatgcccacggcg
aagcgactcgttctcgagcgacagggtcggacgatcgtcctcaacgcgccgttcggccat
accgccaacgagacgctggggcgggtcctctcgtcgctgctcgggcaacgggccggttcc
tccgtgggcctcgagaccgatccctaccggatcgaactcgaggtcccgacctcgatcgcg
acaagcgacgtcctggaggtactggaggggaccgaccccgaccacgtcgagacgatcgtc
gaactcgggctgaagaactcggatgccctggcgttccggctggcacaggtctccgccaag
ttcggcgcgctcaagcgctggcagggccaggggtcgggccggatctccaacgaacggctg
ctggccgccctcgaggacaccccgatgtacgaggaggcgatccgcgaggtcttccacgag
gatttagacgccgagcgcgcgagtgcggtgctcgaggggatccagtcgggcgagatcgat
ctcgtgacccaccgcggccggaccccggtcggacagggcgggcgttcctccggcggcaag
gaactgctcgcgccggagaacgccgacgcgagcgtcatcgagaccgtccgcgagcgactg
cagaacgaccgagtcatcctcctgtgtacccactgcaaggactggaaggtcaagacgaag
gtcaaacgcgtccgcgaccagcccgagtgccccgagtgtgggtcgacccgaatcgcgtcg
ttgaacccgtgggccgacgaggtcgtgcaggcggtccgcgccgaggagaaagacgaggaa
caggagaagatgaccgagcgggcctatcgtgcggcgagcctggtccagagccacggcaag
caggcggtcatcgcgatggccgcccgcggcgtcgggccgcacaacgccgcccagatcatc
aacaagctccgggaggacgaatcggcgttttaccgcgatatcctctcgaaagaacgggag
tacgcgcggacacagtcgttctgggactga

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