Natronobacterium lacisalsi: CHINAEXTREME20020
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Entry
CHINAEXTREME20020 CDS
T04669
Name
(GenBank) rhodopsin
KO
K04641
bacteriorhodopsin
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
hlc04030
]
CHINAEXTREME20020
G protein-coupled receptors [BR:
hlc04030
]
Others
Others
Bacterial rhodopsin
CHINAEXTREME20020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_rhodopsin
CNNM
Motif
Other DBs
NCBI-ProteinID:
APW99916
UniProt:
A0A1P8LVS0
LinkDB
All DBs
Position
complement(4105586..4106308)
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AA seq
240 aa
AA seq
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MATVGPESLWLWVGTIGMTLGTLYFLGRGRGVRDPKMQQFYIITIFVTTIAAAMYFAMAT
GFGVTEVTVGDDALTIYWARYADWIFTTPLLLLDLALLAGANRNTIATLLGLDVFMIGTG
TIAAFAATPGTRIAWWGISTGALLVLLYVLVGTLSKSARNQSAEVASLFSTLRNLLIVLW
LLYPVVWILGTEGTFGILPLYWETAAFMILDLSAKVGFGVLLLRSHTVLERAITPTPAAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgtaggtccagagtccctgtggctgtgggtcgggacgatcgggatgaccctc
ggaacgctctatttcctcggtcgcggacgcggcgtccgggacccgaagatgcagcagttc
tacatcatcacgatcttcgtgacgaccatcgcggcggcgatgtacttcgcgatggcgacg
gggtttggcgtcaccgaagtgacggtcggcgacgatgcgcttacgatctactgggcgcga
tacgccgactggatcttcacgacgccgctcctgctgctcgacctcgcactgctcgccgga
gcgaaccgcaacacgatcgcgacgctgctcggtctcgacgtcttcatgatcgggaccggc
acgatcgcggcgttcgcggcgacccctggcacccgcatcgcgtggtggggcatcagcacc
ggcgccctgctcgtgctcctgtacgtcctcgtcgggacgctctccaagagtgcccgaaac
cagtccgcggaggtagcctcgctgttcagcacgctgcgaaacctgctcatcgtgctgtgg
ctgctctaccccgtcgtctggatcctcggcaccgaaggaacgttcggcatcctcccgctg
tactgggagacggccgcgttcatgatcctcgacctctcggcgaaggtcggcttcggtgtg
ctcctgctccggagccacacggtactcgaacgagctatcacaccgaccccggccgcagcg
taa
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integrated database retrieval system
