Natronobacterium lacisalsi: CHINAEXTREME20195
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Entry
CHINAEXTREME20195 CDS
T04669
Name
(GenBank) translation elongation factor EF-1 subunit alpha
KO
K03231
elongation factor 1-alpha
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CHINAEXTREME20195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hlc03019
]
CHINAEXTREME20195
03016 Transfer RNA biogenesis [BR:
hlc03016
]
CHINAEXTREME20195
03012 Translation factors [BR:
hlc03012
]
CHINAEXTREME20195
04131 Membrane trafficking [BR:
hlc04131
]
CHINAEXTREME20195
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hlc04147
]
CHINAEXTREME20195
Messenger RNA biogenesis [BR:
hlc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
CHINAEXTREME20195
Transfer RNA biogenesis [BR:
hlc03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
CHINAEXTREME20195
Translation factors [BR:
hlc03012
]
Eukaryotic type
Elongation factors
CHINAEXTREME20195
Membrane trafficking [BR:
hlc04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
CHINAEXTREME20195
Exosome [BR:
hlc04147
]
Exosomal proteins
Proteins found in most exosomes
CHINAEXTREME20195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
GTP_EFTU_D4
Gtr1_RagA
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
APW99946
UniProt:
M0LRY5
LinkDB
All DBs
Position
4139248..4140510
Genome browser
AA seq
420 aa
AA seq
DB search
MSEQHQNLAIIGHVDHGKSTLVGRLLYETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDN
LAEERERGVTIDIAHQEFSTDEYDFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDGV
APQTQEHVFLARTLGIDELIIGVNKMDIVDYKESTFDEVVDEVNQLLQQVQFNTDDASFI
PISAFEGDNIAEPSDNTDWYDGETLLEALNDLPEPEPPTDASLRLPIQDVYTISGIGTVP
VGRIETGVMNTGDDVVFQPSDVGGEVKTIEMHHEEVPKAEPGDNVGFNVRGIGKDDIRRG
DVCGPADDPPKVAETFQAQIVVMQHPSVITAGYTPVFHAHTAQVACTIESIDKKMDPSSG
EVAEENPDFIQSGDAAVVTIRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLEVNEK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacaacaccagaacctggccattatcggtcacgttgaccacgggaaaagtacg
ctcgtgggacgactcctctacgagacggggagcgtacccgagcacgtcatcgaacagcac
cgcgaagaagccgaagagaagggtaagggcggcttcgaattcgcctacgtgatggacaac
ctcgccgaggagcgagagcgtggtgtcaccatcgacatcgcccaccaggagttctccacc
gacgagtacgacttcaccatcgtcgactgtcctggccaccgcgacttcgtcaagaacatg
atcactggcgcgagccaggccgacaacgccgtcctcgtcgtcgccgctgacgacggcgtc
gcaccccagacccaggagcacgtcttcctggcccgtaccctgggtatcgacgaactcatc
atcggcgtcaacaagatggacatcgtcgactacaaggagtccaccttcgacgaagtcgtc
gacgaagtcaaccagttgctccagcaggtccagttcaacacggacgacgcctccttcatc
ccgatctcggcgttcgaaggcgacaacatcgccgaaccctccgacaacacggactggtac
gacggcgaaaccctgctcgaggccctgaacgacctgccggagccggagccgccgacggac
gcgtcgctccgacttccgatccaggacgtctacacgatctccggtatcggtaccgttccc
gtcggacgtatcgagaccggtgtcatgaacacgggcgacgacgtcgtcttccagccctcg
gacgtcggtggcgaggtcaagaccatcgagatgcaccacgaagaggtgcccaaggccgag
cccggtgacaacgtcgggttcaacgtccgtggcatcggcaaggacgacatccgccgcggt
gacgtctgtggccccgccgacgacccgccgaaggtcgccgagaccttccaggcccagatc
gtcgtcatgcagcacccctcggtcatcacggccgggtacacgccggtcttccacgcccac
acggcacaggtcgcctgtaccatcgaatccatcgacaagaagatggacccctcgagcggc
gaggtcgccgaggaaaaccccgacttcatccagtcgggcgacgctgctgtggtcaccatc
cgaccgcagaagcccctcagcatcgagccgtccagcgagatccccgaactcggttccttc
gccatccgcgacatgggtcagaccatcgcggccggcaaggtcctcgaggtcaacgagaaa
taa
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