Natronobacterium lacisalsi: CHINAEXTREME20365
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Entry
CHINAEXTREME20365 CDS
T04669
Name
(GenBank) nuclease
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
hlc
Natronobacterium lacisalsi
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hlc03400
]
CHINAEXTREME20365
Enzymes [BR:
hlc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHINAEXTREME20365
DNA repair and recombination proteins [BR:
hlc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CHINAEXTREME20365
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Rhabdo_M1
Motif
Other DBs
NCBI-ProteinID:
APX00172
UniProt:
M0L894
LinkDB
All DBs
Position
pHLAJ5I:6760..9948
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AA seq
1062 aa
AA seq
DB search
MDPTLLTGPQHARLEQRAFQRADDLAADSLGSILYITRNDARRSEIEDRWASSHKPLRLR
SETLDSVVRNWYENLYGPVETLSGQLNRRLTEYALDETTAETAGALAGEPASAALADSFS
SRFSLFDEAGVRTADTLETEFENSSLDDRIATATVDAYHYYRELYADHVDDWVNTRGELF
HGVATADQSLSTLSPEIDVVILSGYYEFRPVERHIIERIVQEFPTIALLPLHQDGRTGVD
VVASDALDVYESLDFETVSLEPKDESGRAFGAVTNALYRPDPETTAVPDGLNWRELPTPE
REIRFVARELRTELANGRDPDDFAVVIPGTNAYSSTVEDTFETFDIPHVTTAASQLTRTF
TGSVVHDLLRLAEPDPRAEDLTSLLANPLVDIVDNEQASTITAAARRRDTISAAPLLEAT
NAETNALLEDLLASLETLRTGDIEEATETFRRLLDDQFDLEAAVGDYASGAEQALEHRAY
EVVDEVLTSFETLEKVSTDQSPLALFTRAFDGIPIQTSQTAAGGHVEVMGLLDARMRSFE
KVFLVGLTSEHFPTTPERPAFFEEMTEAHPRFDTADERLRGRYLFATLLANVDALTITTP
ETGGDESAVVRSPVLDELQRVTGIEPETGVDDRIGSREDLQRHVATASDRRVAVSHAGDR
GDLSPEQTKRTDRGLQCADNRATATLSEHDGLLDPETVDAVYPPSEREPYSASRIEQYVE
CGFKFYADNVLEIEDPDDVEVVPTALETGSYVHDVLERFYADLQDDSEASVDLTDYDRDT
LADHLHTVAVEELRETDFEYDGLFYERWKAELFAGLGDEESVPFEAGVQPHDAPEQGLFA
TFLDNELSRAGAAAPYLFEPPFGEGLPESDSEPFSVERPDGSTVAIRGYIDRIDVNRDVE
QPEITLYDYKTGYAPYMTKTTGGTTFQLPIYLLAANEVIDGDLFDQGTLSATYYQVRPPN
DLKVPRGVESKFDSQTELRRFLEDVVPEWLGQIDDAIANGRFHTTLHSPRGANCRFCDYR
RACDVRHHRKREFVDTAREDEVAYVPLRVRDDEDLQTVMSDD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggatccaacgctccttaccggtccacaacacgctcgtcttgaacaacgggcgtttcag
cgggccgatgatctcgccgccgattcgctggggagtatcctctacattacccgcaacgat
gctcgtcgaagtgaaatcgaggaccgctgggccagttcccacaaaccactccgccttcgt
tccgagacgctcgattcggtcgttcgcaactggtacgaaaatctatacggtcccgtcgaa
acgctgtctggccagctaaaccgccgactcaccgagtacgcgctcgacgaaacgacagcg
gagacagcaggcgctctcgcgggcgagccggcctctgccgcgcttgcggattcgtttagt
agccgcttttcactcttcgatgaggcgggcgtcagaactgccgatacactcgagacggag
ttcgagaactcatcgctcgacgaccggattgcaacggccaccgtcgacgcctatcactac
taccgcgaactgtatgccgatcacgtcgacgactgggtcaatacccgcggtgaactgttc
catggcgtcgcgacggcagaccagtcgctatcaacactctcacctgagatcgacgtcgtg
attctctccggctattacgagttccgtcccgtcgaacgccacattatcgagcgtatcgtt
caggagttcccgacgattgcactgctgccactccatcaggatggccgaacgggtgtcgat
gtcgtcgcgagtgacgccctggatgtctacgagtcgctggatttcgagacggtgagtctc
gagccaaaagacgagtccggaagagcgtttggggcggtcaccaacgctctctatcgcccg
gatcctgagacgaccgcagttccggatgggctcaactggcgcgaactgccgacgccggaa
cgcgaaattcgcttcgtcgcccgcgaactccgaaccgagctggcgaacggacgggatcca
gacgacttcgcggtcgttattccaggcacgaatgcgtattcgagcaccgtcgaggacacg
ttcgagacgttcgatattccacacgtgacgactgccgcatcgcagctgacacggacgttc
accggcagcgtcgtccacgatctgctgcgccttgctgagcccgacccacgggctgaagac
ctcacgtcgctgctagcgaatcccctggtcgatatcgtcgacaatgagcaagcctcgacc
atcactgctgctgctcgtcggcgcgatacgatttcggcagcaccgcttctcgaggcgacc
aacgccgagacgaacgcattactcgaggatctgttagcgagcctggaaacgcttcgaacg
ggagacatcgaagaagcaaccgagacgttccgccgactgctggacgatcagttcgacctc
gaggcagctgtcggggattacgccagcggtgccgagcaggcactcgaacaccgagcctac
gaggtcgttgacgaggtgctcacctccttcgaaactctggagaaagtcagtaccgaccag
tccccactcgcgctgttcactcgggccttcgatggcatcccgattcaaacatcgcaaacc
gctgctggaggccacgtcgaagtgatggggctgctcgatgctcggatgcgatcgttcgag
aaggtctttctcgttggcctgacgagcgaacacttcccgacaacgccggaacgaccggcc
tttttcgaggagatgaccgaggcccatccccggttcgacaccgccgacgagcgcctccgt
ggtcgatatctgttcgcaaccctgctcgcgaacgtcgatgcgctcacgatcactacaccg
gagacaggcggtgatgagtctgccgtcgtccgctcccctgtcctcgacgaactacagcgt
gtcaccgggatcgaacccgaaaccggtgttgacgatcgtatcggctctcgagaggacctc
cagcgtcacgtcgcgactgcctccgaccgtcgtgtcgcagtcagtcatgccggcgaccgg
ggcgatctttcacccgagcaaacgaagcgcactgaccgtggcctccagtgcgcggacaac
agggcaacggcaaccctttccgaacacgacggcctgctggaccccgaaacggttgacgcg
gtttatccaccgtcggagcgagaaccctacagtgcgagtcgaatcgagcagtacgtcgag
tgcgggttcaaattctatgccgacaacgttctcgagatcgaggatcctgacgacgtcgaa
gtcgtgccaacggctctcgagaccggatcgtacgttcacgacgttctcgagcgcttctac
gcagacctgcaggatgactccgaagcgagcgtcgatctcaccgactacgaccgagatacg
cttgccgaccatctccacacggttgccgtcgaagaactccgtgagaccgatttcgagtat
gatgggctcttctacgagcgctggaaggcagaactctttgcgggccttggtgatgaggag
tccgtcccattcgaagccggcgtacaaccccacgatgctcccgaacaaggactattcgcc
acgttcctcgacaacgaactctccagggccggcgctgctgctccatacctgttcgagcca
cccttcggcgaagggcttccagagtccgatagcgagccgttttcagtcgaacggccagat
ggatcgacggttgcgattcggggctatatcgaccgtatcgacgtgaatcgtgacgtcgaa
caaccggagatcacgctctacgactacaagaccgggtacgcaccatacatgacgaaaacg
actggcggaacgacgttccagctccccatctatctgctcgctgcgaacgaggtcatcgat
ggtgatctgttcgaccagggcaccctctcagcgacgtactaccaggtgcgaccgccgaac
gatctcaaggtccccaggggggtcgaatcgaagttcgactcgcaaaccgaactccggcgc
ttcctcgaggatgtcgttcccgagtggctcggacagatcgacgacgcaatcgccaacggg
cggttccacacgacgttgcactctccccgaggtgcgaactgccgcttctgtgactaccgt
cgggcgtgtgacgttcgccaccatcgcaagcgtgagttcgtcgacaccgctcgcgaggac
gaggtcgcatacgtgccgctccgtgttcgagacgacgaggatctgcagacggtgatgagc
gatgactga
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