Natronobacterium lacisalsi: CHINAEXTREME21115
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Entry
CHINAEXTREME21115 CDS
T04669
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
hlc
Natronobacterium lacisalsi
Pathway
hlc03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hlc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CHINAEXTREME21115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlc03021
]
CHINAEXTREME21115
Transcription machinery [BR:
hlc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
CHINAEXTREME21115
Prokaryotic type
Archaeal type
TFB
CHINAEXTREME21115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DZR
RB_B
DZR_2
FYVE
PHF5
YhfH
Zn_ribbon_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
APX00301
UniProt:
M0LA75
LinkDB
All DBs
Position
pHLAJ5I:189322..190248
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AA seq
308 aa
AA seq
DB search
MTTRDIYESGFDEDVRTESSANQCPECDGQVTTNAVETVCEDCGQVIDEQRIDHGPEWRA
YDGEECERTGAPLTAARHDRGLSTEIGRGTDAKGNELSAKKRRRLARMRREQTRSRWRSK
AERNLAHGLSEVRRLASALELSVSVRNQACHLFRSAQNEDLLRGRSIEAIAAASVYGACR
CNGLSRLVDDISEMARVAESRVTNAYKTLNEELGLPAEPISPSMFVPRLASDLECPDEIR
QRARTLAEQAEESGVTTGVHPAGFAAACLYKAGREEGRWLTQSEAADVANASKATVRAHR
DTLEEQVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccagagacatctacgagagcggattcgacgaagacgtccgaacggaatcgagt
gcgaaccaatgccccgagtgcgacggccaagtcacgacgaacgcggtcgaaacggtctgc
gaggactgtggccaggtcatcgatgaacagcgcatcgatcacgggccggagtggcgggcg
tacgacggcgaggagtgcgaacgaacgggcgccccactcactgcggcccgccacgatcgc
ggcctgtcgacggaaatcggtcgcggcaccgacgcgaaggggaacgaactctccgcgaag
aagcgacggcgactcgcgcggatgcgccgtgagcagacccgtagtcgttggcggtcgaaa
gcggaacggaatctcgcccacggactgagcgaggtgcgtcggttggcgagtgcgctcgag
ctctccgtttcggtccgcaaccaggcatgtcatctcttccggagcgcccagaacgaggat
ctgcttcgtggcagatccatcgaagccatcgccgcggctagcgtgtacggggcctgccgg
tgcaacggcctctcgcggttagtagacgacatcagcgagatggcccgcgtcgcggagtca
cgggtcacgaacgcgtacaaaacgctgaacgaagagctgggcctccccgctgaacccatc
tcccccagcatgttcgtgccgcgactcgcctcggacctcgagtgcccggacgagatccga
cagcgggcccgaaccctcgcagagcaggccgaagagagcggcgtcacgacgggcgtccat
ccggccgggttcgcagcggcctgcctctacaaggccggtcgcgaagaggggcgatggctg
acgcaatctgaagccgcggacgtggcgaacgcctcgaaggcgactgttcgggcacaccgg
gatacgttggaggaacaggtcgcctga
DBGET
integrated database retrieval system
