KEGG   Haliaeetus leucocephalus (bald eagle): 104828124
Entry
104828124         CDS       T08630                                 
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Pathway
hle03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:hle00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104828124 (PBRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hle03021]
    104828124 (PBRM1)
   03036 Chromosome and associated proteins [BR:hle03036]
    104828124 (PBRM1)
Transcription machinery [BR:hle03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     104828124 (PBRM1)
Chromosome and associated proteins [BR:hle03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    104828124 (PBRM1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 104828124
NCBI-ProteinID: XP_010559900
LinkDB
Position
Unknown
AA seq 1691 aa
MGSKRRRATSPSSSVSGGDFDDGHHSTNIPGPSRKRRRLSNLPTVDPIAVCHELYNTIRD
YKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNVLTADFQLL
FNNAKAYYKPDSPEYKAACKLWELYLRTKNEFVQKGDAEEEDEDEDGHDNQGANSELSSP
GYLKEILEQLLEAVAVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQN
GTYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANAIKKIFNMKKAEIEHSELAKSSLRI
RTPSNLTASKLTGPSSQGKGSVGDERNSSNKYYRNKRSAQGDRLSAITMALQYGSESDED
AALAAAARYEEGESEAESITSFMDTSNPLYQLYDTVRSCRNNQGQLISEPFFHLPSKKKY
PDYYQQIKAPISLQQIRTKLKNHEYETLDQLEADLNLMFENAKRYNVPNSAIYKRVLKMQ
QVMQAKKKELARRDDIEDGDSMISSATSDTGSSKRKSKKNIRKQRMKILYNAVLEAREPG
TGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKMIEHNIRNDKYVGEEAMIEDMKLMFRNA
RHYNEEGSQVYNDAHMLEKILKEKRKELGPLAEDDDVASPKLKLSRKSGISPKKSKYMTP
MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYVTIKKPVDMEKIRSHMMANK
YQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRREIEGDEDSHVPNVTLL
IQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRL
DLFQENMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKH
LHNDVEKEKKEKLPKEIEEDKLKREEEKREAEKSEDSSGSAGLSSLHRTYSQDCSFKNSM
YHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEV
FKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVYVCESRYSAKTKSFKKIKLWT
MPVSSVRFVPRDVPLPVVRVASVFANTDKVDEEKHTETLEDSKVGESILHLEKDKEDVPV
EMSNGEPGCHYFEQLCYNDMWLKVGDCVFIKSHGLVRPRVGRIEKMWVRDGAAYFFGPIF
IHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCVVLSFKDFLSCRPTEISENDVFL
CESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQQLEAKF
AELEGGDEDMEEMGEEEGDMTETPSMPQLQTPLASELDIMPYTPPQSTPKSVKGSTKKEG
SKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLEATKKAEYEERAAKVA
EQQERERAAQQQNSSPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAGMISGYPPVLPPLQ
GPVDGIVSMGSMQPLHPGVPPPHQLPPGMPGIPGIPPPGVIGQNVSPMVGTPAPGASPFG
QQIGILGPPGQQAPPPYPGQSPASQPVMQQPTTPMFVSPPPKTQRLLHSEAYLKYIEGLS
AESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTL
NIRQAYNIENV
NT seq 5076 nt   +upstreamnt  +downstreamnt
atgggttccaagaggcgaagagctacctcgccttccagcagtgtcagcggaggagacttt
gatgacggccaccactccacgaatataccaggcccaagcagaaagaggaggagactttcc
aatctcccaactgtagatcctattgctgtatgccatgaactttacaacaccatcagagat
tacaaagatgaacaaggcaggctcctttgtgagcttttcattagggcaccgaagcgaaga
aatcagccagattattatgaagtggtttctcagccaatcgatctaatgaaaatccaacaa
aagctaaagatggaggaatatgatgatgtgaatgtgctgactgctgattttcagcttctc
tttaacaatgcgaaggcttactataagcccgattctcctgaatataaagctgcctgcaaa
ttatgggagttgtatttgcgcacaaaaaatgaatttgttcaaaaaggtgatgctgaggag
gaagacgaagatgaggatggacacgacaatcaaggcgcaaattctgaattatcatctcca
ggttacctgaaggaaattcttgaacagcttcttgaagctgtagctgttgccacaaaccca
tcgggacgcctcataagtgaattgtttcagaaacttccttctaaagtgcaatatccagat
tattatgcaataataaaggagcccatagatcttaaaactattgcccaaaggatacagaat
ggaacttacaaaagcattcatgcaatggcaaaggatatcgatcttctggcaaagaatgcc
aaaacctacaatgagcctggatcacaagtatttaaggatgcaaatgcgattaaaaaaata
tttaatatgaaaaaggctgaaattgaacacagtgagttggccaagtcaagtctccgaatc
aggactccatcaaatttgactgcttccaagctgacaggtccttcctcacagggtaaaggc
agtgttggtgatgagagaaattcttctaacaaatattatcgtaacaaaagatcagcccaa
ggggatcgtttatcagcaataaccatggcattgcaatatggatcagaaagtgatgaggat
gcagctttggctgctgctgctcgttacgaagagggagaatctgaagccgagagcattact
tccttcatggacacttctaatcctctttatcagctttatgacacagttagaagttgccga
aataatcagggccagctcatatctgaaccctttttccacttgccctccaagaaaaagtat
cctgattattatcagcaaattaaagcacctatttcattgcagcagatcagaacaaaactg
aagaaccatgaatatgaaactttagatcagttggaggctgatctgaacttgatgtttgaa
aatgccaagcgctacaatgttcccaattctgccatctataaaagagtactgaaaatgcag
caggttatgcaggcaaagaagaaggagcttgctaggagagatgacattgaggatggggac
agtatgatttcttctgctacatctgatactggaagttcaaaaaggaaaagtaaaaagaat
atacgaaagcaacgaatgaagatcttatacaatgcagttctggaagctcgagaaccgggc
acaggcagacggctctgtgatctgtttatggttaagccatccaaaaaggactatccagac
tattataaaattatcttggaaccaatggacttgaaaatgatagaacacaacatccgcaat
gataagtatgtaggggaagaagccatgattgaagacatgaagctcatgttccgaaatgca
aggcattataatgaagaaggctcccaggtgtacaatgatgcccatatgctggaaaagatc
cttaaagaaaaaaggaaagaactgggacccctagctgaagatgatgatgttgcatcccct
aaactaaaactaagtagaaaaagtggcatttctcctaaaaaatcgaaatacatgactcca
atgcaacagaaattgaatgaggtgtatgaagcagttaagaattacacggataaacgaggc
aggcgactgagcgccatcttcttgaggctgccatctcggtctgaacttcctgactattat
gtaaccattaaaaagcccgttgacatggaaaagatcagaagccatatgatggcaaataaa
taccaggatattgattccatggtagaggactttgtaatgatgttcaataatgcttgcaca
tataacgagccagaatctctgatttataaagatgccctggtcctgcataaagttttgctt
gaaactcggagagaaatagaaggagatgaggattctcatgtgcccaatgtcactttgcta
attcaggaacttatccataacctttttgtatcagttatgagccaccaggatgatgagggc
agatgctacagcgactccttagctgagattcctgctgttgatcccaacttcccaaataaa
cctcctctgacttttgatattatccgaaaaaatgttgaaaataatcgctatagaagattg
gacttgttccaggagaatatgtttgaggtactggagagggcaaggagaatgaataggact
gattcagagatttacgaggatgcggttgaacttcagcagttctttattaaaattcgagat
gaactttgtaagaacggagagattcttctgtcacccgctctcagctataccaccaagcat
cttcacaacgatgtagaaaaggaaaagaaggaaaagctgcccaaagaaatagaggaggat
aagctcaaaagagaggaagagaagagagaagctgaaaagagtgaagattcttctggatca
gctgggctgtcaagcttgcatcggacctacagccaggattgcagcttcaagaacagcatg
taccatgtaggagattatgtgtacgttgagcctgctgaagccaacttgcaacctcacata
gtctgtattgagaggctgtgggaagattcagctggagagaaatggctctatggctgttgg
ttttatcgaccaaatgaaacgtttcatcttgcaacacgaaaattcttggagaaagaagtt
tttaaaagtgactattacaataaagttcctgttagcaaaattttaggcaaatgtgtggtc
atgtttgtcaaggaatattttaaactgtgtcctgaaaacttcagagatgaggatgtctat
gtctgtgagtcacgttattctgcgaagacaaaatcttttaaaaagattaaactgtggact
atgcctgtaagctctgtaagatttgtcccacgagacgtgcccctgcctgtggtccgtgtt
gcttctgtgtttgctaatacagacaaagtagatgaggagaaacacactgaaacattggag
gacagcaaggtgggagaaagtatccttcatcttgaaaaggacaaagaagatgttcctgta
gaaatgtccaatggagaacctggttgccattactttgaacagctctgctacaatgatatg
tggcttaaggttggggactgtgtcttcataaaatcacatgggttagtgcgacctcgagta
ggaagaattgaaaagatgtgggtgcgagatggagctgcatatttctttggtccaatcttt
atacatcctgaagaaactgaacatgaaccaactaaaatgttctataagaaggaagtgttt
ttgagtaacttggaggagacctgtccgatgacttgcattttgggaaagtgtgtggttctg
tcattcaaagacttcctctcctgcagaccaacagaaatctctgaaaatgatgtttttctt
tgtgagagccgctacaatgaaagcgacaaacaaatgaagaaattcaaagggctgaagagg
ttttcactctctgcaaaagttgtagatgatgaaatatactatttcagaaaacccatagtt
cctcagaaggaaccatctccactactggaaaagaagattcagcagctagaagcaaaattt
gctgagttggaaggaggtgatgaggacatggaagagatgggagaagaggaaggtgatatg
actgaaacaccttctatgcctcagcttcagaccccgttagctagtgaattggatataatg
ccttatactccgccacagtccactcccaagtctgttaagggcagcaccaagaaggaggga
tcaaaaaggaagatcaacatgagtgggtacatcttatttagcagcgagatgagagctgtg
attaaagctcagcacccagactactcctttggagagctcagcaggcttgtaggaactgaa
tggagaaacttggaagcaacaaagaaagcagaatatgaagagcgggcagctaaagttgct
gagcagcaggagagagagcgagcagcacagcagcagaattcctccccccgggcaggcact
cctgtcggggctcttatgggggtggtgccgccaccaacaccaatgggaatgctcaatcag
cagttgacacccgttgcaggcatgataagtggctatccaccggtgctgccacctttgcag
ggcccagttgatggcattgttagcatgggcagcatgcagccacttcacccaggggtgccc
ccaccccaccaacttccgccaggtatgccaggcatcccaggcatcccaccacccggtgtt
ataggccaaaatgtgtcccccatggtaggcactccagcacccggagcaagtccttttgga
cagcagataggaatccttggcccaccgggacagcaggcaccgcctccgtatcccggccag
agcccagcaagtcagccagttatgcagcagcccacaactcccatgttcgtctcccctcca
ccaaagacacagaggcttcttcattctgaagcgtatctgaaatatattgaggggcttagt
gctgaatcaaatagtattagcaagtgggaccagacccttgcagcacgaagacgagatgtc
cacttatcaaaagaacaagagagccgactcccttcacactggttgaaaagtaaaggggct
cataccacaatggctgatgcattatggcgtctgcgagacttgatgctacgagacaccctt
aatatccgtcaggcatacaacatagaaaacgtttag

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