Haliaeetus leucocephalus (bald eagle): 104828388
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Entry
104828388 CDS
T08630
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104828388 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hle03021
]
104828388 (SMARCC1)
03036 Chromosome and associated proteins [BR:
hle03036
]
104828388 (SMARCC1)
Transcription machinery [BR:
hle03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104828388 (SMARCC1)
Chromosome and associated proteins [BR:
hle03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104828388 (SMARCC1)
PBAF complex
104828388 (SMARCC1)
GBAF(ncBAF) complex
104828388 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
104828388
NCBI-ProteinID:
XP_010560338
LinkDB
All DBs
Position
Unknown
AA seq
990 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLSRPT
IYLIPDIELKLANKLKDIVKRHQGTVTEEKSKATHHVYPSPTSMDDDEWLRPVMKKDKQV
LVHWGFFPDSYDTWVHANEIDAEIEDPPIPEKPWKVHAKWILDTDIFNEWMNEEDYEVDE
NRKSVSFRQRISMKNEEPVRSPERRDRKAAASTRKRKHSPSPPPTPVESRKKTGKKGQTA
LYGKRRGQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDE
QDEETVATGGKEDEDPNKGDQSRSIDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRA
LPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLE
QWGLINYQVDPESRPMAMGPPPTPHFNVLADTPSGLMPLHIRTPQVPAAQQMLSFPEKNK
EKPTDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVG
SRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRV
ASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEP
EKIDGAEEEKMETETDGQQSEKVENKAESEIEEGDKVQEGENERNPEKEQDSEVTADPKP
EEKEAEENKENVDASKDKENEAGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYA
ELRARQQMEQQHSQNPQQPHQHSSGPGMNPLGAAAHPGLLPHQQPPPYPMMHHQMPPPHP
PQPGQMPGPGSMIPGQPMPGRMMPSVSTNIHPAGGGPPPPGMSPMSGNLIGPRVPLAAPN
GMYPPPAQPPPPADGVTPPPAGAPPASAAP
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaagctggaggtacattatgtcacattcttggtgctgcttacaaatataag
aatgaacagggctggcggaggtttgacctgcagaatccatcccgaatggatcgaaatgtg
gagatgttcatgaacattgagaaaacactagtgcagaacaattgtctgagcagaccaacc
atctacctcattccagatatagaattgaagttggctaataaattgaaggatattgtcaaa
cgtcaccagggaacagtaactgaagagaaatcaaaggctacccaccatgtttatccaagt
cctacctcaatggatgatgatgaatggctgagacctgtgatgaaaaaagacaagcaggtg
ctggtacactggggcttttttccagacagctatgacacttgggttcatgccaatgaaata
gatgctgaaattgaggatcctccaattcctgaaaagccatggaaggttcatgccaagtgg
attttggacacagatatattcaatgaatggatgaatgaagaggattatgaggtagatgag
aacaggaaatcagtgagtttccgacagaggatctccatgaaaaatgaagagcctgtacgt
agtccagagaggagagacaggaaagcagcagcaagtacaaggaagagaaagcattctcct
tctccaccccccactcctgtggagtcgagaaaaaagacagggaagaaaggacaaacagcc
ttatatgggaaaaggagagggcagaaagaagaagatgagcaagaagatcttacaaaggac
atggaggatcccacaccagtacctaatatagaagaagtggtacttcccaaaaatgtgaac
ccaaagaaagacagtgaaaacacgcctgtgaaaggaggaacagtagcagaccttgatgaa
caggatgaggagacagtggcaactggcggaaaggaagatgaagatcctaacaaaggtgat
caaagtcggtcaattgatccaggtgaagataatgtcacagaacaaaccaaccacatcatt
attccaagctatgcatcttggtttgactacaactgtattcatgtgattgaacgtcgtgct
cttcctgaattcttcaatggaaaaaacaagtccaagactccagaaatatacctggcttac
cgcaacttcatgattgacacctatcgcttaaaccctcaagagtacttgaccagcactgcc
tgcagaaggaatctgactggagatgtgtgcgctgtcatgagagtacatgcttttctggag
cagtggggtctgattaactaccaagtggatccagaaagccgtcccatggcaatgggccct
cctcctactcctcacttcaatgtgctggctgatacaccctctggacttatgcctctccat
atccgcactccacaggttccagctgctcagcagatgttgagttttcctgagaaaaacaaa
gagaaacctactgatctgcagaactttggacttcgcacagacatttactcaaaaaagact
ttagcaaagagtaaaggtgcaagtgctggaagagaatggacagaacaagagacattgctg
ctattagaagctctggagatgtataaagatgactggaacaaagtctcagagcatgttggg
agccgtacccaagatgaatgcattctccattttctgagacttccaattgaagacccctat
ttggagaactctgatgcctctctgggcccactggcttaccagcccgtacctttcagccag
tctggcaatccagtgatgagtaccgttgcttttctggcatcggtggtggatccccgggtg
gcatcagccgcagcaaaggctgcgttagaggaattttctcgagtcagagaggaggtacca
ctggagcttgttgaagctcatgtaaagaaagtacaggaagcagcaagagcctctgggaag
gtggatccaacatacggactagagagcagctgcattgccggaacaggtccagatgagcca
gagaaaatcgatggagccgaagaagaaaagatggaaactgagacagatgggcagcagtct
gagaaggttgaaaacaaagcagagagtgaaattgaggaaggcgataaagtacaagaagga
gaaaatgagagaaatccagaaaaagagcaagacagtgaagtgactgcagaccccaagcca
gaagaaaaggaggcagaagagaacaaggagaacgttgatgcaagcaaagacaaagaaaac
gaggctgggaagaagaaagtggaacacgaaatctcggaaggaaacgtagctacagctgca
gctgctgcccttgcctcagctgccaccaaagcaaagcacctagcagcagtggaagaaaga
aagatcaagtctctggttgcccttttggtggagacacagatgaagaagctggagataaaa
cttcgccattttgaggagttggaaaccattatggacagagagaaagaggcattagagcag
cagagacaacagttgctgacagaacgccagaattttcacatggaacagctgaaatatgct
gaattaagggctcgtcagcaaatggagcagcagcacagtcaaaacccacagcagcctcac
cagcactccagtgggcctgggatgaacccccttggggcagcagcacatccaggcttactg
cctcatcagcagcccccaccgtaccctatgatgcaccaccaaatgccaccacctcaccca
ccacagccaggtcagatgccggggcccggttcgatgatacctggacagcccatgccaggc
cggatgatgccaagtgtgtcaaccaacatccatccagccggcggtggtccccccccacct
ggcatgtcacctatgtcaggaaatctaattggacctcgtgttcctctagcagctccaaat
ggcatgtatccccctcctgcacagccacctccgccagcagacggggtgaccccacctccg
gcaggagcccccccggcctcagccgctccctaa
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integrated database retrieval system
