KEGG   Haliaeetus leucocephalus (bald eagle): 104829697
Entry
104829697         CDS       T08630                                 
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
  KO
K05236  coatomer subunit alpha
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:hle00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hle04131]
    104829697 (COPA)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hle04147]
    104829697 (COPA)
Membrane trafficking [BR:hle04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    104829697 (COPA)
Exosome [BR:hle04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104829697 (COPA)
  Exosomal proteins of bladder cancer cells
   104829697 (COPA)
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR75_1st WD40_RFWD3 WD40_MABP1-WDR62_1st ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR41 Beta-prop_SCAP Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 104829697
NCBI-ProteinID: XP_010562443
LinkDB
Position
Unknown
AA seq 1224 aa
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDKLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAESLKETFDT
EKETIPDIDHNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDTV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
AAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGLKNALPAIGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEQ
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAAAFARRLLELGPKPEVAQQ
TRKILSACEKNLTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFHGQI
CRITTVTEIGKDVIGLRISPLQFR
NT seq 3675 nt   +upstreamnt  +downstreamnt
atgctgaccaagttcgagactaagtcggcccgggtgaaagggcttagctttcaccccaag
cggccgtggatcctcaccagcctgcacaatggcgttatccagctgtgggattatcgaatg
tgcacccttatcgacaaattcgatgagcacgacggacccgttcgaggtattgatttccac
aaacagcagcctctgtttgtttctggaggtgatgattacaaaataaaggtctggaattac
aaattgcgccgttgtctcttcactctgctcgggcacttggattacattcgcactaccttc
ttccaccacgaatatccctggatcttgagtgcttctgatgaccagaccattcgggtttgg
aactggcagtccagaacttgtgtttgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagtttggatcagactgtgcgc
gtttgggatatttctggcctaaggaagaagaacctgtcccctggagctgtggaatcggat
gtcaggggaataacaggggtggatttgtttgggacaacggatgcggttgtgaagcacgtt
cttgagggccacgatcgtggggtgaactgggctgccttccaccctacaatgccacttatt
gtgtcaggagctgatgatcggcaagtgaagatctggcggatgaatgaatcgaaggcctgg
gaggttgacacttgccgggggcattacaacaacgtctcgtgcgctgtctttcacccacgg
caggagctaatactcagcaattcagaagacaagagtatccgtgtctgggatatgtctaaa
cgcacgggtgtccagacctttcggcgtgatcatgatcgcttttgggtattggctgctcac
cccaacctcaacctctttgctgcaggccatgacggtggcatgattgtattcaaactggag
cgtgagaggcctgcttatgctgtgcatgggaacatgctgtattatgtgaaggaccgtttc
ctccgccagcttgatttcaacagttcaaaagatgttgctgtcatgcagctgcgaagtggt
tccaagttccctgtgttcaatatgtcatacaacccagctgagaacgccgtccttctctgc
acaagagccagtaacttagagaacagtacttatgacctatacaccattcccaaggatgca
gactcccagaatccggatgcccctgaagggaagcgttcctccgggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctaatcaaaaacctg
aagaatgagatcacgaagaaggtgcaggtgccgaactgtgatgagattttctacgctggc
acagggaacctgttactgagagatgcagactccatcaccctctttgacgtgcaacagaag
cgaactctggcctcagtgaagatctccaaggtgaaatacgtcatctggtcagctgacatg
tcccatgtagctctgctggctaagcatgccatcatgatctgcaacagaaagctggagtca
ctgtgtaacatccatgaaaacatccgtgtcaagagcggtgcctgggatgaaagcggtgtt
ttcatctatactaccagcaatcacatcaaatacgctgtcaccaccggggatcatggaatt
atccgcaccctggacctgcctatctatgttacccgtgtgaaggggaacaacgtgtactgc
ctggacagagagtgccgccccagggtcctcacaattgatcccacagaattcaaattcaag
ctggcattgatcaacagaaagtatgatgaggtgctgcacatggtgaggaatgctaagctt
gtgggccagtccatcattgcctacctgcagaaaaagggctacccagaggtggccttgcac
tttgtcaaggatgagaagacccgtttcagcctggcactggagtgtggcaacattgagatt
gctctggaagcagccaaagctctggatgacaagaattgctgggagaaactgggagaggtg
gcattgctgcagggaaatcatcagattgtggagatgtgctaccagcgcaccaagaacttt
gataagctttccttcctctatctcatcactggcaatctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactatcagaatgccttgtatctagga
gatgtggcagagagagtgaggatcctgaagaactgtgggcaaaagtccctagcctatctc
acggctgcaactcatggtctggatgaggaagctgaaagtctgaaggaaacatttgatact
gaaaaggaaacgattccagacattgatcacaatgcaaagctgctgcagcctcctgctcct
gtcatgcctctggataccaactggccattgctgactgtctccaaggggttcttcgaagga
acaattgctagcaaaggcaaagggggtgccttagctgccgatatcgatattgacactgtt
ggcactgaaggctggggagaagatgcagagttgcagttggatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtttaggtaaaggccaggaagaaggaggtggatgg
gaagttgaagaagatttggatcttccccctgaactggatgttcctgctggtccagcagga
gcagcagaggatggattctttgtgccacccaccaagggcaccagcccagctcaggtgtgg
tgtaacaattctcagcttcctgttgaccacattctggcaggctcctttgagacagcaatg
agactcctccatgaccaggtaggagtaacaaactttggaccctacaagcagctgttcctg
cagacctatgcccgtggccgtacaacctaccaagccctgccatgtctccctaccatgtat
ggatacccacatcgcaactggaaagaagctggcttaaagaatgccctccctgccattgga
ctgaaactcaatgacctgatccagcgcttgcagctgtgctaccagctcactacggctggc
aagtttgaggaggccgtggagaagttccgctccatcttgctcagtgtgcccttgctggtg
gtggacaacaagcaggagattgctgaggcccagcagctgatagccatttgccgggagtat
attgtaggactctcaatggagattgagcgaaagaagctgcccaaagagaccctggaacag
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctgcagcctgtccac
atgatcttggtgctgcgtactgctctcaacctctttttcaaactcaaaaacttcaagaca
gctgctgcttttgcccgtcggctgctggagctgggtccaaagcctgaggtggcccagcag
actcgcaagatcttgtcagcatgtgagaagaatctcactgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggcaaa
cccgtggagaagtgtccactaagcggagcctgctactgccctgagttccatgggcagatc
tgccgcatcactacagtgacggagattggcaaagatgtcatcgggctgcggatcagccca
ctccagttccgctag

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