Haliaeetus leucocephalus (bald eagle): 104831424
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Entry
104831424 CDS
T08630
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain
KO
K06823
collagen type XVIII alpha
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hle04147
]
104831424 (COL18A1)
00535 Proteoglycans [BR:
hle00535
]
104831424 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
hle00536
]
104831424 (COL18A1)
Exosome [BR:
hle04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104831424 (COL18A1)
Proteoglycans [BR:
hle00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
104831424 (COL18A1)
Glycosaminoglycan binding proteins [BR:
hle00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104831424 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Fz
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
104831424
NCBI-ProteinID:
XP_010565292
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MGKGTVAENTEQWDWNATGLVESTARPSIAPPRGTSLAPDQDVASSSTDDPQLLGTGTTK
DPQLLGTGTTEDLQLLGMGNTEDPQFLGMGNTEDPQFLGTGTPAATRTQMSLQRPAGPRP
GSAPFPFSPGDSTRDQVVPPRDPTAQPPRYHHGASPAPPNLRHGTGHRGLVLAGKNGSWS
PSLPNRRVANGVDPPFANNSGPLEFDLLTATMQLYGSSGTGLASFLPGLMPPAGRCLPIP
THLPFCSVLGTNHFRLPNYLRHSSEAEIRAALHEWEGLLESRCHRYVEWFLCLLLLPGCS
ASVPITPPPCQGFCEAVRDLCWMHLAGGHLPLPCDALPKEDEGYSCVFINASAENLSTEV
SLLELIGDPPPEEILKIYGPDNNPGYVFGPNANTGQVARYHLPSPFYRDFSLLFHIQPTT
PRAGVLFAVTDSSQSIIYVGVKLSELQAGKQKIIFYYTEPGSPSSYAAATFTVPTLLNQW
TRFAISVEEDEVILYLDCEEHERVRFERSPDEMELEDGSGLFVAQAGGADPDKYQGVIAD
LKLQGDPRAAERQCEEEDDDTEEVSGDFGSGAEGGHQPSGKVGGVPGLVDAVPVTAPPVV
AGSGPRSSGGSPQQAERTRAEETLRVSAGGTGPKGEKGEKGERGLKGDSGTGGIMGMGSV
KGEKGEKGELGIKGSAGFGYPGSKGQKGEPGEPGPPGTLSRHTDGSVVEQVTGPPGPPGK
DGAPGRDGEPGDPGEDGKPGDMGPQGFPGTPGEPGLKGEKGDPGVGPRGPPGPPGPPGPP
GPFSKHDKLTFIDMEGSGFGGDLESLRGPRGPPGPPGPPGVPGLPGEPGRFGMNHTDLLG
RPGLPGRDGTPGPPGPAGPQGPPGRDGAAGQPGPKGEQGDVGDLGLPGAPGPKGNKGEMG
PAGAPGEMGLAGLPGPIGPRGPPGPPGPPGPAGRGYEAGFGDMEGSGLPFTAGSPGPPGP
EGPQGVPGLPGVKGEVGSPGQPGLPGLKGDAGVPGVDGRPGLEGFPGPQGPKGDRGSPGE
KGERGQDGVGLPGPPGPPGPPGQVTTVSSEDKSLVALPGPEGRPGHAGFPGPVGPKGDRG
SSGPQGSPGLKGEKGEPGVIISPDGTMVTAKVKGEKGEPGPRGPMGPSGPQGRAGMKGEI
GFPGRPGRPGMNGLKGEKGDPADVSSVLGLRGPPGPPGPPGPPGPPGSIVYDSSNAFSDS
SHPALPAFPGFHQFPGQKGEKGDAGAPGPPGHFPYDLSHFSASLRGDKGDAGPKGEKGES
GSTPLYGPSISGLPGPPGPQGYPGLPGPKGDSIIGPPGPPGPQGPPGMGYEGRQGPPGPP
GPPGPPSFPGPHRQAISIPGPPGPPGPPGPPGTSGMSLGLRTLPTYQAMLSAAHELPEGS
LVFLTDRQELYVRLRGGFRRVLLEEHTLIPSSALDNEVYDKPPSIHYAGPQXPLHPLHNH
SPPPTARPWHGDEVVANQHRLPEQPLLHHQHELLNSYYIHRRPDPAPVAAHVHQDFQPAL
HLVALNAPLSGGMRGIRGADFQCFQQARQVGLAGTFRAFLSSRLQDLYSIVRRADRAAVP
IVNLRDEVLFSNWEALFTGSGAPLRAGARILSFDGRDVLRDVGWPQKSIWHGSDAKGRRL
PESYCETWRTEERAVTGQASSLGSGKLLEQMASSCQHAFVVLCIENSFMTAAKK
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaggggaccgtggccgaaaacaccgagcagtgggactggaatgccacggggctg
gtggagagcactgcacggccaagcattgctcctccccgtggcacgtcacttgcccctgac
caggatgtggccagcagctccaccgatgacccgcagctcctggggacagggaccaccaag
gacccacagctcctagggacagggaccaccgaggacctgcagctcctggggatggggaac
accgaggacccgcagttcctggggatggggaacaccgaggacccgcagttcctggggacg
gggacccctgcagcgaccaggacacagatgtccttgcagagaccagcgggtccccggcca
ggtagtgccccttttcctttctcaccaggtgacagtacccgtgatcaggtggtgccgccc
cgggaccccacggcgcaaccaccccgataccaccatggagcatcgcccgccccaccgaac
ctgcggcatggcaccggccaccgggggctggtgctggctggcaagaacgggagctggagt
ccttctttgcctaacaggagggtggctaacggtgtggatcctccttttgccaataactcc
ggtcctctcgagtttgatttactaaccgccactatgcaactctacggtagtagcggcaca
gggctcgcatccttcttacccggactgatgccaccggctggccgttgcctgcccatccca
acccacctgcccttctgcagcgtgctgggcaccaaccatttcagattaccgaattacctc
cgccacagcagcgaggcagaaattcgggccgctttgcatgagtgggaggggctgcttgaa
tcgcggtgccatcgctacgtggagtggtttctctgcttgctcctgctccccgggtgtagt
gcctcagtccccataacccccccgccgtgccagggcttctgcgaggccgtcagagacctg
tgttggatgcacttggctggcgggcacctgcctctgccctgtgatgctctccccaaggag
gacgaagggtattcttgtgtctttattaatgcttctgcagagaacctgagcaccgaggtc
agcctcctggagctgatcggagaccccccaccagaagagatcctcaaaatttatggccct
gacaacaaccccggctatgtcttcggccctaacgccaacacaggccaggtggcccggtac
caccttccaagccctttctaccgggacttttcccttctgttccacatccagcccaccacc
ccccgggccggtgtgctttttgccgtcacggactcctcacagagcatcatctatgtgggt
gtcaagctctcggagctgcaggcaggcaagcagaaaatcatcttctactacacagagccg
ggctcgccaagctcatacgcggcggccaccttcactgtgcccaccttgctcaaccagtgg
acgcgctttgccatcagcgtagaggaggatgaagtaattctctacctggactgtgaggag
cacgagcgggtccgcttcgagcgctccccggatgagatggagctggaagatggctccggg
ctcttcgttgctcaggctggaggggccgacccagataaatatcagggggtgattgctgat
ttgaagctgcaaggggacccgcgggcggccgagcgccagtgcgaggaagaggatgatgac
accgaggaggtctccggcgatttcggcagcggggcagaaggtggccaccaaccctcaggg
aaggtcgggggtgtcccggggctggtggatgctgtccccgtcactgctccccctgtggtg
gcgggcagtgggccaaggagcagcgggggctccccgcagcaagccgagaggaccagagca
gaggagacgctgcgggtctccgcaggaggcaccggccccaaaggtgaaaagggagagaag
ggcgaacgtggcctgaaaggggactcagggaccggaggcatcatggggatgggcagtgtc
aaaggcgaaaagggggagaaaggagaattgggcattaagggcagtgctggatttggctac
cctggctccaagggccagaaaggggaaccgggtgaacccggcccccctgggaccctctca
cggcacaccgatggctcggtggtagagcaggtcaccggtcccccagggccaccggggaag
gacggagcccccggcagggacggcgagcccggcgatcctggcgaggacggcaaacctggc
gatatggggccccaggggttccccgggacaccaggcgagcccggtctgaagggggagaag
ggtgacccaggtgtgggaccaaggggaccccctggaccacctggccccccaggaccacca
ggacccttctccaagcatgacaagctgaccttcatcgacatggagggctctggcttcggc
ggcgacctggagagcctgcggggtccacgagggccacccggtcccccagggccacccggt
gtgcccggtttgccaggggagccaggacggtttgggatgaaccacacggacctgctggga
cggccggggctgccaggcagggacgggacccccgggcccccagggccagcgggtcctcag
ggtcctcctggaagagatggggcagctgggcagccagggcccaaaggagagcagggcgac
gtgggcgaccttggcctccccggtgcaccaggacccaagggcaacaagggagaaatggga
ccagcaggagccccaggagaaatgggtttagctggccttcctgggcccatcggaccccga
gggcctccagggccccccggtcccccaggaccagcggggagaggctacgaggctggattt
ggcgacatggagggctcggggctgccattcaccgctggctcccctggaccacccggaccc
gaaggaccacagggagtgccaggactgccgggggtgaagggggaggttggcagccctggg
cagcccggcttgccgggactgaagggagatgctggcgtacccggtgtggatggccggcct
ggcctggagggcttccccggaccgcagggacccaaaggtgacagaggcagccccggcgag
aagggtgagcgaggccaagatggtgtggggctgcccgggccccctggtccacctggtccc
cctggacaggtcactactgtctctagtgaagataagtctttggtggctttgcccggtcca
gagggcagaccaggtcacgccggcttcccgggcccggtgggaccgaaaggcgaccggggg
tcatctggtcctcagggctccccagggttgaagggggagaaaggggagcctggcgtcatc
atcagccccgatgggaccatggtcactgcaaaggtgaaaggagaaaagggggagccgggg
ccacggggaccgatgggaccctcgggtccccagggacgagcagggatgaagggagagatc
ggctttccgggcagacccggacgtcccggcatgaatgggctgaagggtgagaagggtgac
cccgcggatgtcagtagcgtactgggcttgcggggtcccccagggcccccaggtccccca
gggccccctgggccacccggcagcatagtctatgacagcagcaatgccttcagtgactcc
agccatcctgcactgccagccttccccggtttccaccaatttccaggacaaaagggagag
aaaggtgatgctggagccccgggacccccaggccacttcccctacgacctgagtcacttc
agtgccagcctgcggggtgacaagggggatgcaggtcccaagggtgagaaaggcgagtca
ggcagcaccccactctacggtcccagcatctctgggctgccagggcctccagggccccag
ggctaccctgggctgccgggtcccaagggggacagtatcattgggccgccagggcctcct
ggacctcagggcccccctggtatgggatacgaggggcggcagggcccccctggccctcct
ggtccccctggtccaccctccttcccaggtccccacagacaagctatcagtatccctgga
ccccctggaccaccaggaccccctggaccaccaggcaccagtgggatgtccttggggctg
cggaccctgccgacctaccaggcgatgctgagtgctgcgcacgagctgcccgagggcagc
ctcgtcttcctgactgaccggcaagagctctacgtccgcctgcgcgggggcttccgacgg
gtgctgctggaggagcacaccctgatccccagttcggctctggacaacgaggtgtacgac
aagccacccagcatccactatgccggcccccagnnncccctgcaccccctccacaaccac
agccccccacccaccgcccgtccctggcacggggatgaggtggtggccaaccagcaccgg
ctgcccgagcaacccctgctccaccaccagcacgagctcctcaacagctactacatccac
cgccggccggatccggcccccgtggccgcccacgtgcaccaggacttccagcctgccctt
cacctggtggccctgaatgccccgctgagcggtggcatgcgcggcatccggggcgccgat
ttccagtgcttccagcaagcccggcaggtcgggctggccggcaccttccgcgccttcctc
tcctcccgcctgcaggacctctacagcattgtgcgcagggctgaccgcgccgccgtgccc
attgtcaacctccgggacgaagtgctcttcagtaactgggaagcccttttcacgggcagc
ggggccccactgcgagctggcgcccgcatcctctcctttgacggccgggatgtcctgcgg
gatgtgggatggccgcagaagagcatctggcacggctcggatgccaagggtcggcgcttg
cccgagagctactgtgagacgtggcggacagaggaacgtgccgtcaccggccaggcttcc
tcgctgggctctggcaagctgctggagcagatggccagcagctgccagcatgccttcgtc
gtcctctgcatcgagaacagcttcatgactgccgccaaaaagtga
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integrated database retrieval system
