Haliaeetus leucocephalus (bald eagle): 104831559
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Entry
104831559 CDS
T08630
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03015
mRNA surveillance pathway
hle04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104831559 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104831559 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hle03021
]
104831559 (SYMPK)
03019 Messenger RNA biogenesis [BR:
hle03019
]
104831559 (SYMPK)
Transcription machinery [BR:
hle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104831559 (SYMPK)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104831559 (SYMPK)
U7-dependent histone pre-mRNA processing factors
104831559 (SYMPK)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
INTS7_N
Motif
Other DBs
NCBI-GeneID:
104831559
NCBI-ProteinID:
XP_010565511
LinkDB
All DBs
Position
Unknown
AA seq
1098 aa
AA seq
DB search
MAGPAEGPSPRMSVASQFFSEEECGSDGMSTSERVVDLLNQAALITNDSKINILKQVQEL
IINKDPTLLDNFLDEIIAFQADKSIEVRKFVVGFIEEACKRDIELLLKLIANLNMLLKDE
NVNVVKKAILTMTQLYKVALQWMVKSKVISELQEACWEMMAAMASDIILLLDSDNDGIRT
HAIKFVEGLIITLSPRMADSDVPKRHENDISLERIPKDHPYIKYNVLWEEGKAALEQLLK
FMVHPAISSINLTAALGSLATIARQRPMFMAEVIQAYETLHANLPPTLAKSQVSSVRKNL
KLHLLSVLRHPSSGDFQPQITTLLVDLGTQQAEIARSMPSPRDARKRTRDEPDTTLKKMK
IEPPLGEDDEDKDLEPTTVTAPKATGQTNIPSDTDITAEFLQPLLTPENVANLVLISMVY
LPEAMPASFQATYTPVESAGTEAQIKHLSRLMATQMTAAGLGPGVEQTKHLKEEPKEEKA
AKPESVVIKRRLSALAQGQAISVLGAQGSAANLLEEEAPQTKRRPEPIIPATQPRLAGAG
GRKKVFRLADVLKPLSDAQMEKLKLSAVKRILRAERAVACSGAAQARVKILASLVTQFEV
PLKSEVLAFVLDDIRGRLDLAFAWLFQEYNAYLSRYPAGSLERYDECLIGLLAGLQEKPD
QKDGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLL
DLSSHEKDKVRQQALLFIKRMYEKDQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEV
AAPWTEETIKQCLYLYLALLPHNHKLIHELASVYTEAIADIKRTVLRVIEQPIRGMGMNS
PELLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGL
EKKEVIQALPKLIKLNPIVVKEVFNRLLGTQHGDGASAVSPLNPGELLIALHNIDSSKCD
MKSIIKATNLCFAERNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQALTMYPRLGGFVMN
ILSRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVVLQLPPPQLAAIFDKCPELREPLLSH
VRALTPHQVTPPPQGATC
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccggctgaaggccccagcccccgcatgagcgtggcctcccagttcttcagc
gaggaagagtgcggtagcgatggcatgagcacttccgagcgggtggtggatctcctcaat
caggcggctttgatcaccaacgattccaagatcaacatcctcaagcaggtgcaggagctg
atcatcaacaaggacccaacgctgctggacaacttcttggatgagatcatcgccttccag
gctgacaagtccatcgaggtgcggaagttcgtggtgggtttcatcgaggaggcctgcaaa
cgggacattgagctgctgctgaagctcatcgccaacctcaacatgctgctcaaggatgag
aacgtcaacgtggtgaagaaggccatcctcactatgacccaactctacaaggtggctttg
cagtggatggtgaaatcgaaggtgatcagcgagttacaggaagcttgctgggagatgatg
gcggccatggccagcgacatcatcctcctcctcgactcagataacgacggcatccgcacc
cacgccatcaagttcgtggagggactcatcatcaccctgtcaccccgcatggccgactct
gacgtccccaaacgtcacgagaatgacatcagcctcgagcgcatccccaaagaccatcct
tatatcaaatacaatgtgctgtgggaggaaggcaaagctgccctggagcagctcctcaag
ttcatggtacacccagcaatctccagcatcaacctgacagctgcgctgggttccctggcc
accatcgcccgccagcgccccatgttcatggctgaggtcatccaagcctacgagaccctt
cacgccaacctgccccccaccctggccaagtcacaggtgagcagcgtccgtaagaacctg
aagctgcacctactcagcgtcctgcggcacccgtcctcgggggacttccagccccagatc
accaccctcctcgtcgacctgggcacccaacaggctgagattgcccgcagcatgcccagc
ccccgcgatgcccgcaaacgaacccgcgatgagcccgacaccaccctcaagaagatgaag
atcgaaccccccctgggcgaggatgatgaggacaaagacctggagccgacgacggtgaca
gcacccaaagcgactggccagaccaacatcccctcggacacggacatcaccgccgagttc
ttgcagccactcctcaccccggaaaacgtcgccaacctggtgctgatcagcatggtgtac
ctccctgaggccatgcccgcgtccttccaggccacctacacccctgtggagtcagccggc
accgaggcacagatcaaacacctctcccggctcatggccacccagatgacggcagcagga
cttggccccggtgtggagcagacaaaacacctgaaggaggaaccaaaggaggagaaggcg
gccaagccagagagcgtggtgatcaagcggcggctgtcagcgctggcccagggccaggcc
atctccgtgttgggtgcccaaggttcggccgccaacctgctagaggaggaagccccccaa
actaaacgtcgccctgagcccatcatcccagccacacagccccggctggcgggcgctggc
ggccgtaagaaggttttccgtctggctgacgtcctcaagccactgagcgatgcgcagatg
gagaagctgaagctgagcgctgtcaaacgcatcctgcgcgccgagcgtgccgttgcctgc
agcggggccgcccaggctcgcgtgaagatcttggcctcactggtgacgcagttcgaggtg
ccactgaagagcgaggtgctggccttcgtcctcgatgacatccgcggccgcttggacctg
gctttcgcctggcttttccaggagtacaacgcctacctgagccgataccccgccggcagc
ctggagcgctatgatgagtgtctcattgggctcctcgccggtctccaggagaagcctgac
caaaaggacgggattttcaccaaagtggtgctggaggcgccgctgatcactgagagcgcg
ctggaagtcatccgcaagtactgcgaggacgagagccggacctacttaggcatgtccacg
ctgcgtgacctcatcttcaagcggccatcacggcaattccagtacctccacgtcctgctg
gacctcagctcccatgagaaggacaaggtacgccagcaggccctcctcttcatcaagcgc
atgtacgagaaggaccagttgcgggagtacgtggagaagtttgccctcaactacttgcag
ctcttggtgcaccccaacccaccctccgtcctcttcggggctgacaaagacacggaggtg
gcggcaccatggacggaggagaccatcaagcaatgcctctacctctacctggcgttgctg
ccccacaaccacaagctcatccatgagttggcttctgtctacaccgaggccatcgccgac
atcaagcgcactgtcctgcgggtcatcgagcagccgatccgtgggatggggatgaattcg
cctgagctactgctgctggtggagaactgtcccaagggagccgagacgctggtgacacgc
tgcctgcacagcctgacggacaaagtgcctccctcacccgagctggtgaagagggtccgc
gacctctatcacaagcggctgccggatgtgaggttcctcatccccgtcctcaacgggctg
gagaagaaagaggtgatccaggcgctgcccaaactcatcaagctcaaccccatcgtggtc
aaggaggtcttcaaccgtctactggggacacagcacggtgacggtgcctcagccgtgtcc
ccgctgaacccaggagagctgctcatcgctctgcacaacatcgactcctccaagtgcgac
atgaagtccatcatcaaggccaccaacctgtgctttgctgagcgaaacgtgtatacctcg
gaggttctggcagtggtgatgcagcagctgatggagcagaacccattgcccatgttgttg
atgcgaaccgtcatccaggccctcaccatgtacccccgcctgggcggcttcgtcatgaac
atcctctcccggctcatcatgaagcaggtgtggaagtaccccaaagtctgggaaggtttc
atcaagtgctgccagcgcacgaagccccagtccttccaggtggtgctgcagctgcccccc
ccgcagttggccgccatctttgacaagtgccccgaactgcgcgagcccctcctcagccac
gtccgggccctcaccccccaccaggtgacacccccaccccagggagccacctgctaa
DBGET
integrated database retrieval system
