Haliaeetus leucocephalus (bald eagle): 104832076
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Entry
104832076 CDS
T08630
Symbol
IGHMBP2
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hle03009
]
104832076 (IGHMBP2)
03012 Translation factors [BR:
hle03012
]
104832076 (IGHMBP2)
Enzymes [BR:
hle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104832076 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104832076 (IGHMBP2)
Ribosome biogenesis [BR:
hle03009
]
Eukaryotic type
Other ribosome biogenesis factors
104832076 (IGHMBP2)
Translation factors [BR:
hle03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104832076 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
Helicase_RecD
zf-AN1
Viral_helicase1
ResIII
DEAD
nSTAND3
AAA_22
AAA_16
SLFN-g3_helicase
UvrD-helicase
Flavi_DEAD
AAA_25
IstB_IS21
AAA
T2SSE
ABC_tran
DAP3
DnaB_C
UvrD_C_2
PhoH
AAA_18
Herpes_ori_bp
Motif
Other DBs
NCBI-GeneID:
104832076
NCBI-ProteinID:
XP_010566351
LinkDB
All DBs
Position
Unknown
AA seq
1015 aa
AA seq
DB search
MAAEAAERQLELLREEREAEVAESRAWQESISLKELQRRGICLLRLQAANQRTGLYGRLL
VTFQPRKYDSDAELPYNSFGPGDIVGLYDSAGQGDPLSTGIVTRVTSKAVTVAFEESRDG
MLSLDRDSSYRLLKLANDVTYNRLKKALNALKQYHSGPASDLIDVLFFSSDPSAFSDTKP
LKLYNDSLDASQREAVSFSLAQRELAIVHGPPGTGKTTTLVEIILQAVQQGLKVLCCAPS
NVAVDNLVERLAGYKAHILRLGHPARLLKPIQQHSLDAVLARGDNAQIVADIRKDIDQAF
AKTKKAQDKGERSHFLSEIKALRKELKEREETAMAAALTHASVVLATNTGASSDGPLKLL
PENHFDLVVIDECAQALEASCWIPLLKAPKCILAGDHKQLPPTIISHKAAAKGLSLSLME
RLIERYGEKIVKMLTMQYRMHQTIMQWASSEMYSGRLTAHPSVAQHLLKDLPGVTSTEET
TIPLLLIDTAGCGLFELEVEDEQSKGNPGEVQLAGLHIQALVEAGVKAKDIAVVAPYNLQ
VDMLREHLCHRYPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRA
RRHVAVICDTRTVSNQTFLKRLVDYFSQYGEVRTAFEYLDNLVPENYTQEDCSERQQGAK
LPAASGPKKQPPLGKKLKAAATKPGYQKPEASFSPNTSGPGRESPGTKDSADGFKAMLVA
FLESSEMQLDFPPSLNSHDRMLVHLMAEEYGLQHVSTGEGKDRYISIRKKEPAETSLPTA
TPCSKQLPLSQPQHPSRETPVPAEPGGSSEGSGKVDLKTLHLERVQREKARREEAARKAQ
EPSASLQGSSRKKDKREAKGKPAVKSGANSMAEEDIDALISAAIKADNTCGFPRCKASVT
TLGQLCLHCNRRYCLSHHIPEVHGCREKAKAYARQRISREGVLYPGSGSKDKSLDPAKRA
HLQQRLDKKLSELTSQRKSKKKDKRNEGSECYFFNLGVTGQTTXTKDAIKGTGPG
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggaggcagcggagcggcagctggagctgctgcgggaggagcgggaggccgag
gtcgccgagagcagggcatggcaggaaagcatctccctgaaggaattgcagcgcagaggc
atctgcttgctaagactccaagctgccaaccagagaaccggcctctacggacggctgctc
gtgacatttcagcctagaaaatacgattcagatgctgagctgccctacaacagttttggg
cctggggacattgtgggcctctatgattccgctggccagggtgatccgctctccactggc
attgtaacacgtgtcacctccaaagcagtgactgttgcctttgaggaatctcgagatggc
atgctgagcttggaccgagacagctcttaccgcctgctgaaattagccaatgatgtcacc
tacaacaggctgaaaaaagctttaaatgcactaaagcagtatcacagtggtccagcctct
gatctgatcgacgtcctcttcttttcttctgatccaagtgcattcagtgacacaaagcct
ctaaagctttacaatgactcgctggatgcatcacagagagaggctgtctccttttcactg
gcacagagggagcttgccattgtccatggcccgcctggcacagggaagactacaacacta
gtagagatcatcttgcaagctgtacagcaaggcctgaaagtcctgtgttgtgccccttcc
aatgttgctgtggataatctggtggaaaggctggctggctacaaagcccacatcctgcgg
cttgggcaccctgctcgcctgctgaagcccatccaacagcattccttggacgcagtcttg
gcccgtggcgacaatgcccagatagtagcagatatcaggaaggacatcgaccaggccttt
gcaaaaaccaaaaaggctcaagataagggagagcggagccattttctcagtgagattaag
gcactgagaaaggagctgaaggaacgagaagaaactgccatggctgcagcccttacccat
gccagtgttgtccttgctacgaatacaggtgcttcctctgatggcccactgaagttgctt
cctgaaaatcactttgatctcgtggtgatagatgagtgtgctcaggccctggaagccagt
tgctggatacctctgctgaaggctccaaagtgcatcctggctggggatcacaaacagctt
ccccccaccatcatctctcacaaggctgctgccaagggcctttcactcagcttgatggag
cgtctcatcgagaggtacggggagaagatagtgaagatgctgacgatgcagtaccgaatg
caccagaccatcatgcagtgggcttcctcggagatgtacagcggccggctcactgctcac
ccatcagtagcccagcatttgctcaaggacctgccgggcgtcacctctacagaagagacc
acaattcccttattgcttatagacactgctggctgtggcctgtttgagctggaagtggaa
gacgaacagtctaaggggaatccaggggaggtgcagctggccggtttgcacatccaagcc
ttggtggaagctggtgtgaaggcaaaagacatcgctgttgtagccccctacaacctccag
gtggacatgctaagagagcacctttgccacaggtacccagaactagaaattaaatcagtt
gatggtttccaaggaagagagaaagaggcagtgatcctgtcgtttgtgagatccaacagg
aaaggtgaagtgggctttcttgcggaagaccggcggataaatgtagcagtgacccgcgcc
cggcgccacgtggctgtcatctgcgacacccgcactgtcagcaaccaaacctttctgaag
cggctggtggattatttcagccagtatggggaggtacgtacagcctttgagtacctcgac
aacctcgtgcccgaaaactacactcaggaggactgcagcgagcggcagcaaggtgcaaag
cttcctgcagcatctggccccaaaaagcagccgcctctggggaagaaactcaaagcagca
gcaaccaaaccagggtatcagaagccagaagcgagtttctccccaaacacaagcggacct
ggaagagagagcccagggacaaaagacagtgctgatggattcaaggccatgctggtggcc
ttcctggagagcagtgagatgcagctggatttccccccatccctcaattctcatgatcgg
atgctggttcacctaatggcagaggagtacgggctgcagcatgtgagcaccggcgaaggg
aaggaccggtacatcagcattcgcaagaaagagcctgccgagacttcgctacccacagcc
accccctgcagcaagcagctccccctttctcagccacaacatcccagcagggaaactcct
gtccctgctgagccaggaggaagcagtgagggctcaggaaaagtggacctgaaaaccctg
cacctggagagagttcagagggagaaagccagacgggaggaggcagcaaggaaggctcag
gagcccagtgccagtcttcagggcagcagcaggaaaaaagacaaaagggaagccaaagga
aagccagcagttaagagcggagcaaacagcatggcagaagaagatatcgacgctctgatt
tctgctgccattaaagctgacaacacctgtggcttcccccgctgcaaagccagcgttaca
accctgggacagctttgccttcactgcaataggcgctactgcctcagccatcacatcccg
gaggttcatggctgcagggagaaggccaaggcctacgcacggcagaggatcagcagagaa
ggggttctctatcctgggagtggctccaaagacaagtccctggacccagccaagagagcc
catctccagcagcgcctggacaagaagctcagcgaactgaccagccagagaaagagcaaa
aagaaagacaagagaaatgaaggatctgaatgctacttttttaaccttggagtcacaggt
cagactacataaaccaaagatgctattaaaggtacagggccgggctga
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integrated database retrieval system
