KEGG   Haliaeetus leucocephalus (bald eagle): 104832403
Entry
104832403         CDS       T08630                                 
Symbol
IFT140
Name
(RefSeq) LOW QUALITY PROTEIN: intraflagellar transport protein 140 homolog
  KO
K19672  intraflagellar transport protein 140
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:hle00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:hle03037]
    104832403 (IFT140)
Cilium and associated proteins [BR:hle03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   104832403 (IFT140)
SSDB
Motif
Pfam: TPR_IF140-IFT172 Beta-prop_IFT140_1st Beta-prop_IFT140_2nd TPR_IF140_C WD40_CDC20-Fz Beta-prop_EML_2 ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_EML WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WDR55 TPR_IFT80_172 WD40 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 TPR_COPA_B TPR_GEMI5 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 WDR90_beta-prop_4th Consortin_N Clathrin WD40_MABP1-WDR62_1st EIF3I RNase_HII RLMM_N
Other DBs
NCBI-GeneID: 104832403
NCBI-ProteinID: XP_010566859
LinkDB
Position
Unknown
AA seq 1413 aa
MAVYVDHRTEAPDSVASPSHIAWHPLHPLLAVASISTASGGCVDIYLEQGEHVSDAHVER
NFQVTSLSWHPSRPILAAGWESGEVVILNKQDKEHHAVPPNHNAKITALNWSTNGTSLVS
GDRHGVLVLWRMDQRGRVQGPALLKQEYGKCLSHCVFRPPPPGEDFVQLAKAAVSGDEKA
LDKFNWRKAGTGAPLKMGLQEGLSFFITLTDGSVHYVNEKGKTRHVLSTDSLVQKLLFME
KRDVLLVITENLQLSLHAVTLEGEAEELMKVKLSGKTGHSADIILIDHSLVVTALGETVI
RFWDLDRDENYVLSPDVQFGFEGGECINCISYCSAKGLLAAGTNKGRIAMWRKASGSDQS
IRALEGKEKWKLQAPTELEGNVTQIKWGSRKNLLAVNNISSVVILSEQAISSHFHQQVAV
VQVSPNLFNVTIFSTGTTHSLRVDMNVNGVFATKDAVAFWNGKQVTVFECSGDAFRSAGS
FLCDSPVLSVHGENLYTVEPYRVQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTD
LAHFKIFDLSRREAKVHCNSKNFFELFPGLGGIASVKCNASGNKVSILVSKADGNIDSKI
CFYDVEMDKVTLFDFKAEQGNGREKLSSGQSIDKSVVQYPELHSHIPACHFWDQSEPRLF
VCEAILETGLQSPDQKKKQTESTMDVWIISFFSTEEHGLLLQDSFPLPSSYQVLLGIEVP
HYYFAKKLGEAEKGQAESGSIKVSQMVVRRPMRDFIGLGDCDKTTRDAMLNFSYYLTAGD
MDEAFKSIKLIKSEAVWENMARMCVKTQRLDVAKICLGNMGHARGAKALREAEQEPEQEA
RVAVLAIQLGMLEDAERLYKACKRYDLLNKFYQASNQWQKAIETAEAHDRVHLRTTYYNY
AKHLEATGEQSLALTHYEKSDTHRFEVPRMLSEDLQALENYVNKMKDKSLWKWWAQYLES
QSDMESALKYYALAQDYFSLVRVHCFQGNIQKAAEIANETGNWAASYHLARQYESQDDIK
QAVHFYTRAQAFNNAIRLCKDNNLDDQLMNLALLSSPEDMIEAACYYEEKGEQMDRAVML
YHKAGHFSKALELAFATQQFGALQLIAEDLDDKSDPALLARCSDFFIEHAQYEKAMELLL
TAKKYHEALQLCLKQNLTITEEMAEKMTVCKDSKDLSEEAQRELLEQIADCCMRQGNYYL
ATKKYTQAGNKLKAMRALLKSGDTKKIVFFAGVSREREIYIMAANYLQSLDWRKDPEIMK
NIISFYTKGRALDLLAGFYDACAQVEIDEYQNYEKAQGALTEAYKCLSKAKTRSPLEEES
KLAHLQSKMTLIKRFIHARRVYSEDPKEAVRQCELLLAEQDFDNAIRHGDVLGFLVXTLC
TSAGIPYGLPVSGRDAEKNSTYEPELLCDSTDH
NT seq 4242 nt   +upstreamnt  +downstreamnt
atggctgtgtatgtggatcatagaacagaagctcctgattcagttgcctccccttctcat
atagcatggcacccacttcatccactcctggcagttgcttccatcagcacagcatctggg
ggctgtgtggatatctacctggaacaaggagagcatgtgtccgatgcccatgttgagaga
aactttcaggtcacatcactttcctggcacccctctagaccgattcttgcagcaggctgg
gagtctggagaagttgtgatacttaacaaacaagataaggagcaccatgctgtaccacca
aatcataatgcgaaaattacagccctaaactggagtacaaatggtaccagccttgtgtct
ggtgataggcatggtgtcttggttctatggagaatggaccagcgaggcagagtgcagggt
cctgccctgctgaaacaagagtatggaaaatgtctgtctcactgtgtctttcgaccacct
cctcctggcgaggactttgtacagctggcaaaagcagctgtgagtggtgatgagaaggcc
ttggataagtttaactggagaaaagctggaacaggagcacctctgaaaatgggactccag
gaaggactctccttctttatcactttgacagatggttctgtgcattacgtgaatgagaaa
ggaaagacaaggcatgtattgtccacagacagtctggtccaaaagcttctgttcatggag
aaaagagatgttttacttgtaataacagagaatctgcagttgtccttgcatgcagttact
cttgagggagaggcagaagagctcatgaaggtgaagttgagtgggaagacaggtcattct
gcagacatcattttaatagaccatagccttgttgttacagcactaggcgagacagtcatc
aggttctgggatttggaccgagacgagaactatgtgctctccccagatgtgcagtttggc
tttgagggaggagaatgtatcaactgtatttcttactgcagtgctaaaggtctcttagca
gctggtactaacaaagggagaatagctatgtggaggaaagcatcaggatctgatcagagc
atacgggctttggagggcaaggagaagtggaagctccaggcacctactgaacttgaagga
aatgtcactcagataaagtggggatcccgaaaaaacctgctggcagtgaacaacatcagc
tctgtggtgatcctgagtgagcaggccatatcgtctcattttcatcagcaagtggctgtt
gtacaggtgtctcccaacctgtttaacgtgaccatcttcagcacaggaaccacacacagt
cttcgtgttgatatgaatgttaatggagtcttcgctactaaggatgctgtagcattctgg
aacgggaagcaagttactgtctttgagtgctcaggagatgccttcagaagtgcaggctct
tttctttgtgactctccagttctgtccgtgcatggagaaaatctgtatacagttgagccg
tatcgcgtccaggtccgcacctggcagggcacagttaaacagctgctggtgttctccgaa
gcagaggggaatccatgcctcttggacgtctgcggaaatttcctggctgtgggaactgat
ttggctcactttaaaatctttgatctctcccgcagagaggcaaaagtgcactgcaatagc
aagaatttcttcgagctgtttcctggccttggaggcattgcatctgtcaagtgcaatgct
agtggcaataaagtcagcatccttgttagcaaggcggatgggaacattgattccaagatc
tgtttctatgatgttgaaatggacaaagttacactctttgatttcaaggctgaacaggga
aatggtagagagaagctttcttctggacaaagcattgacaagtctgttgtgcagtatcca
gagttgcacagccacatccctgcttgccatttctgggaccagagtgaaccaagacttttt
gtatgtgaagcaattcttgaaacaggcctacagtctccagaccagaagaaaaaacagact
gagagcacaatggatgtttggattatatcgttcttcagtactgaagagcatggccttttg
cttcaggacagttttccattgccttcatcctaccaggttcttctgggcatagaggtgcca
cattattactttgcaaaaaagctgggagaagctgagaaaggacaagcagagtctggctca
ataaaggtgtctcagatggttgtgagaagacccatgagagatttcattggattaggagac
tgtgataagactacccgggatgccatgctgaacttcagctactatctgactgctggagac
atggatgaggccttcaaatccatcaagctgataaaaagtgaggctgtctgggagaacatg
gctcgcatgtgcgtgaagactcagaggctcgatgttgccaaaatttgccttggaaacatg
ggtcatgcaagaggagctaaggcattgagggaggctgaacaagaaccagagcaggaggcc
agagtggcggtgctggccattcagctgggcatgctggaagatgcggagcgactctacaag
gcttgcaaacgttacgacctcctgaacaagttctatcaagcctcaaaccagtggcagaaa
gccatcgaaacagctgaagctcacgatcgggttcacctacgcaccacgtattacaactac
gctaagcacctggaggcaaccggagagcagagtcttgcactcacccactatgagaagtca
gacacgcataggtttgaggtaccccgcatgctctctgaagacttacaagccctggagaac
tatgtcaacaagatgaaagacaagagcctgtggaaatggtgggcacagtatctggaaagc
caatccgatatggaatctgcactaaaatactatgcgctggctcaggattatttttcccta
gtccgtgtccactgctttcagggcaacattcagaaggctgctgaaatagcaaatgaaacg
gggaattgggcagcatcgtatcacttggcccgccagtatgagagtcaggatgacatcaag
caggctgtacatttctacaccagggcccaggcatttaacaatgccatccgcttgtgtaag
gataacaatttagatgatcagctgatgaacttggctcttctcagctctccagaagacatg
atagaggcagcctgctattatgaggaaaagggggagcaaatggacagagctgtcatgtta
taccataaggcaggacatttctccaaagcactggagcttgcctttgccacgcagcagttt
ggggccctacagctaattgctgaagacctggatgataaatcagacccagctctgctagcc
cgttgttctgatttttttattgaacatgctcagtatgagaaggcaatggagttgctgcta
acagccaaaaagtaccatgaagctctgcaactttgcctgaagcagaacctgaccattacg
gaagagatggctgagaagatgacggtctgtaaggactccaaggacctctctgaggaggcc
cagagagagctgttggaacaaattgctgattgctgcatgagacaaggcaattactacttg
gcgaccaagaaatacacgcaagcaggaaacaagttaaaggctatgagggcactgctgaaa
tctggagataccaagaaaattgtcttctttgcgggagtttccagagagagagagatttat
atcatggcagccaactatctacaatcactggattggcggaaggaccccgagattatgaag
aacatcattagcttctatactaaaggaagggcccttgacctgctcgcaggtttctatgat
gcatgtgctcaggtagaaattgatgagtatcagaactatgagaaagcacaaggagcactg
acagaagcgtataagtgcctttcaaaagcaaagactagaagccctctggaagaggaaagc
aaactagcacatttgcaaagcaagatgaccttgattaagcgattcatccatgctcggaga
gtttactctgaagatcccaaggaggcagtcagacagtgtgaacttctcctagctgaacaa
gattttgacaacgccatccgtcacggcgatgtcttgggatttctggttngaacattatgt
acaagtgcaggaattccatatggcttaccggtatctggaagagatgcagaaaagaattcc
acctatgaacctgagctactatgtgactccacagaccattga

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