KEGG   Haliaeetus leucocephalus (bald eagle): 104832678
Entry
104832678         CDS       T08630                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Pathway
hle03013  Nucleocytoplasmic transport
hle03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104832678 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    104832678 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hle03019]
    104832678 (THOC2)
   03041 Spliceosome [BR:hle03041]
    104832678 (THOC2)
Messenger RNA biogenesis [BR:hle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104832678 (THOC2)
Spliceosome [BR:hle03041]
 Complex C
  Other components
   EJC/TREX
    104832678 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104832678 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 104832678
NCBI-ProteinID: XP_010567275
LinkDB
Position
Unknown
AA seq 1621 aa
MAALLPAEWIKNWEKGGKNEFVQLCRTLSENKSHDTMGFRDIQQALYELAYHVVRGNLKH
DQASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKSKRDHFTQLVLACLYLVSDTVL
KERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDL
SGNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQT
LCHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNAIIEEHKREI
VEAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWQHAQS
IMDQMPPFYATSHKSIAIALCQLVHVTIEPLYRRVGVPKGAKGSPISSLPNKRAPKQADS
FEDLRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMEILFSCL
LSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKA
QTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKY
LTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQY
VANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTK
KSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGF
LASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQ
HKVHKYITSCELVMAPVHDAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREV
NKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNW
LLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSD
IIYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGN
KADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQA
LERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVAATVQN
GPGGAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVINKAVNATPKVTTSNGNSASN
SKITKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDDKAREIKEK
TPKSDKEKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDVAKEMKSKENA
KGGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKGTAMLPKVPLVSEN
YSSLRVISIHFLQDNLNELKESSAKHYINHTTPTLSKSKEREVDKKDLDKSRERSREREK
KDEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKEKN
KSKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKPEKKEKRDSTGGKEEKKHHKSSDKH
R
NT seq 4866 nt   +upstreamnt  +downstreamnt
atggcggcgctgctccctgccgagtggataaagaactgggagaaagggggcaagaacgag
ttcgtgcaactatgtcgcactctcagtgaaaacaaaagccatgatactatgggtttcaga
gacatccaacaggctttgtatgaactcgcataccatgttgtcaggggaaacttaaagcat
gatcaagcttctaatgttcttggtgatgtcatagaatttcgggaagacatgccttctatc
ctagctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaagtaag
agggatcattttacccaactggtattagcctgtttgtatcttgtatctgacactgtcctg
aaggagcgcttagatccagagacactggagtcattaggacttataaagcagtctcaacag
ttcaatcagaaatctgttaaaataaagacaaaactgttttataagcaacagaagtttaat
ttgttaagagaggagaatgaaggttatgcaaagctcattgcagaactgggccaagactta
tctggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttt
aaccttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgag
tatgatgacttctttgtaccactgatagagtcttacatgtacatgtgtgaacctcaaact
ctatgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagacacct
tcctccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagat
ctttatgttcatcttcttccgggggataatgccatcattgaggaacacaagcgagagata
gtggaagctaagcaaattgtcagaaaacttacgatggttgtcttatcctctgaaaagacc
gaggaaaaggagaaggaaaaagaaaaagaggaggagaaaaccgaaaagcctcctgataat
cagaagcttggtctattggaagctttattaaaaattggcgattggcagcatgcacaaagt
attatggatcagatgcctccgttctatgctacttcacacaagtctattgctattgccctt
tgccagcttgtacatgtgacaattgaacctctgtaccgcagggttggtgtacctaaagga
gctaaagggtcaccaatttcttctttgccaaacaagagagcaccaaaacaagcagacagc
ttcgaggacttgagaaaggaagtgttcaacatgctttgttaccttggtccgcatctctcc
catgatcccattttgtttgcaaaagtggtgcgccttggaaaagcatttatgaaagagttt
cagtctgatggaagcaaacaagaagataaagagaaaatggagatactgtttagctgtttg
ttgagtattaccgatcaagtcttactgccatctctttctctgatggactgcaacgcatgc
atgtctgaagaattatggggaatgttcaagacttttccataccagtaccggtaccgtctt
tatgggcagtggaagaatgaaacatacaatagtcacccacttctagtgaaagttaaagct
caaaccatagaccgagccaaatatatcatgaagcgtttaactaaggaaaatgtgaaaccc
tctggaaggcaaattgggaagctcagccacagcaatcctacaattttatttgattatatt
ttatcacaaatacaaaaatacgataacttaataactccagttgttgattcactgaaatac
ctcacttcactgaactacgatgttttggcatactgtatcattgaagctctggcaaaccct
gaaaaggagagaatgaagcatgatgacactacgatctcaagctggctgcagagtctggct
agcttttgtggtgcagttttccgaaaatacccaattgaacttgctggtctacttcaatat
gtagccaaccaactgaaagctgggaaaagctttgatttgcttattttaaaagaggtagta
cagaaaatggcagggatagaaattacagaggaaatgacaatggaacagttggaagccatg
actggtggagaacaactaaaagctgagggtggatactttggccaaatcaggaatacaaaa
aaatcttctcagagattgaaagatgcattattggaccatgatcttgcccttccactgtgc
ttgcttatggctcaacagagaaatggtgtgatctttcaagagggaggggaaaaacatctg
aagctggtgggaaaactgtatgatcagtgccatgacaccctggtacaatttggtgggttt
ttagcatccaatctaagcacagaggattacattaagcgagtgccttctattgacgttctc
tgtaatgagtttcatacacctcatgatgctgcatttttcctctcaagacccatgtatgca
caccatatttcttctaagtatgatgaactaaaaaaagctgagaagggaaataaacagcag
cacaaagttcacaaatacattacatcgtgtgagctggtgatggctcctgttcatgatgct
gtaatttctctgcaccttcccaaggtttgggacgacatcagccctcagttttatgctaca
ttctggtctttgacaatgtatgaccttgccgtcccacatagtagctatgacagagaagtc
aataaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaa
aagaaaaaagaaaaagaacgttgcacagctcttcaggacaagctccttgaagaggagaag
aagcagttggagcatgtgcagagggttctacagagactgaaactagagaaggataactgg
cttttggcaaagtctaccaaaaatgagactatcacaaaatttttgcagttatgtatattt
cctcgatgcattttttcggcaatcgatgcagtttattgtgctcactttgtagaacttgtg
catcagcagaaaacacccaacttctccacacttctctgctatgacagagttttctctgat
attatatatacagttgcaagttgcactgaaaatgaagctagtagatatggcaggttttta
tgctgtatgctggagacagtaactagatggcatagtgacagagtcatatatgaaaaggag
tgtggcaactatccaggcttcctaactatattacgggcaactggatttgatggtggaaat
aaagctgatcaattggattatgagaattttagacatgtggtacacaaatggcactataaa
ttaactaaggcttctgtgcactgccttgaaacaggtgaatatacacatatcagaaatatc
ctgattgtgctgaccaaaatccttccatggtatccaaaagtgctgaacctgggccaagcc
ttggaaagaagagtacataagatatgtcaggaagagaaagagaagagacctgatctatat
gcattggctatgggctattctgggcagttgaaaagtaggaagcctttcatgatacctgaa
aatgaattccaccacaaagacccacctgccaggaatgctgtagctgcaacagtgcaaaat
gggccaggtggtgctgggatgcctacatctctcacaataaatacagttagactggaagaa
ggcactaccgaggagactgataaattaaaggagaagtctcagggtgtggtgaaagttatt
aataaagctgtcaacgctacaccgaaggtgacaacaagcaacggaaacagtgcttctaat
agcaaaattactaaagagaaagatgataaagaaaaaagcgggaaggaaaaagataaagaa
aaaaaagacaagactccagctgccactccagagatgaaggcacttgggaaagatgggaaa
gataaaccaaaggaagaacgggcaaacaaagatgataaagcaagagagatcaaggagaaa
acgccaaaatctgacaaagagaaggaaaaagtgaagaaagaagaaaaagcttcaaaagaa
gaaaaatccaagacagtcgttaccatcattgagtcaaagtcaactgcagaaaaggagaga
gagaaggagccgtccagagaaagagatgtagcgaaggaaatgaaatccaaggaaaatgct
aaaggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaa
acatcagaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccatca
cattcctcaacagtaaagggtacggccatgcttcccaaagttcctctggtttctgaaaac
tattccagcttacgtgtcatctccattcattttctacaggacaacctcaacgaactcaag
gaatcttcagcaaagcactacattaaccacactactccaacactgtccaagagtaaggag
agagaagtggacaagaaagatttggacaagtcaagggaaagatccagagagagagagaag
aaagatgaaaaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaagta
ccacaggattcaactaaacgacgcaaagaggaaaatgggacaactggttcttcaaaacat
agtaaaagcgaaagtccttctgattcccctcgcttgaatgaaaaggagaaggagaagaac
aaatcaaaatcttcaggaaaagagaaaggtgattcaattaaagcagaaaagatggagaag
agctcttctggcagcaaaaaggaatcaagacatgataaagaaaaaccagaaaagaaagaa
aaacgagacagtactggagggaaagaagaaaagaaacatcataaatcttcagacaagcac
agataa

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