Haliaeetus leucocephalus (bald eagle): 104833259
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Entry
104833259 CDS
T08630
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle04512
ECM-receptor interaction
hle04514
Cell adhesion molecule (CAM) interaction
hle04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104833259 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
104833259 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
104833259 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hle04131
]
104833259 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
hle04090
]
104833259 (SDC1)
00535 Proteoglycans [BR:
hle00535
]
104833259 (SDC1)
Membrane trafficking [BR:
hle04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
104833259 (SDC1)
CD molecules [BR:
hle04090
]
Proteins
104833259 (SDC1)
Proteoglycans [BR:
hle00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
104833259 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
104833259
NCBI-ProteinID:
XP_010568145
LinkDB
All DBs
Position
Unknown
AA seq
306 aa
AA seq
DB search
MGPTESVSLGSLPCLTQTTNLNLPPEDLDSSGDDDDAFSGSGAGPLTDPSHTWRIPGEPA
NSSLLATPMDFNEQLFRGTESRTEKEVISPSATSNVVTEEPVVAVKDEVSILGSPDEKPT
NDAVITTVRSPTTRLPSVVHVTPSEASGTVHELKPKIPSSEMPDAKDVPEPHSTMHPEGD
ITATPTTTAPKDVVPTHEEVSEDGSGDPGDFILTKDEDLVPTQNSEVPADSGRNAKAAGA
SGIMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHK
QEEFYA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaacggagtctgttagcttgggctccttgccatgcttgactcaaactacaaat
ctgaaccttcctcctgaagaccttgattcatctggtgatgatgacgatgcattctcaggt
tcaggtgcaggtcccctgactgacccgtctcacacctggagaatcccaggagaaccagct
aattcctcattactggcaacaccaatggatttcaacgaacagctgtttcgcgggactgag
agccgaactgaaaaggaagtaatatctccttctgcaaccagtaatgtagtgacagaggag
ccagtggtagctgtgaaggacgaagtgtccatcctgggctcacctgatgagaaaccaaca
aacgatgcagttataacaacagtgagaagccccactactcgcttgccttcagtggttcat
gtaactccttcagaagcctcaggcacggtccacgagctcaaacctaaaatccctagctct
gagatgccagacgctaaagacgtgcctgagccccactctaccatgcatcctgagggagac
atcactgccacccccacgacgacagctcccaaggacgttgttcctacgcatgaggaggtt
tctgaggatggctccggagacccgggagacttcatcttgactaaagatgaggatttggtc
cccacccagaactcagaagtgccagctgactctgggaggaatgccaaagcagcaggagcc
tcaggaattatggacagaaaagaagttcttggaggtgttattgctggaggactagtaggc
ttggtgtttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagacgaa
ggcagctattcactggatgaaccaaaacagtctaatggaggataccaaaaaccacacaaa
caagaagaattctatgcataa
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