Haliaeetus leucocephalus (bald eagle): 104833888
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Entry
104833888 CDS
T08630
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hle03021
]
104833888 (SETX)
Enzymes [BR:
hle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104833888 (SETX)
5.6.2.5 RNA 5'-3' helicase
104833888 (SETX)
Transcription machinery [BR:
hle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104833888 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
Viral_helicase1
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
DUF8602
nSTAND3
RNA_helicase
RNF216P1
Motif
Other DBs
NCBI-GeneID:
104833888
NCBI-ProteinID:
XP_010569183
LinkDB
All DBs
Position
Unknown
AA seq
2815 aa
AA seq
DB search
MSTCRWCTPSGSDTTEFLKSYASKRLSPEDLEGSNDDLCYCLECVVEYHKAREKLPRLHE
VLWELETSRLVAHIKKSMREEAGEDDELFIVDENGDTQLSGYVGPDFENNLRVPLLEILK
YPYLLLHEKVSELCVEVLCRMEQGHSSFQVFEKYPGIYLFLVHPNEVIRRWAILTARNLG
KVDRDDYYDLQEVLTCLFKVIELGLFESPDIYSFSMIERGKLILLPSHLYDTANYKNYWL
GICMLLTVLEEQAMDSLLLGPDKQNDFMQSILHTMERETADDSTDPFWPALHCFMVILDQ
LGSKVWGQLIDPVQAFQTIINSVSYNNEIKNIRSSFKRTKSEPESDYDDDMVTCSQIVYN
YNTEKPQKDTGWKTAICPDYCPNMYEDMQTLANVLQSDIGRDMRVHDSTFLWFIPFVQSL
MDLKDLGVAYIVEVIHYLCSEIKHILNERIQQCDKISEFFLLILVSIIELHRNKKCLHLL
WISSQEWVEAVVKCAKLPAIAFTRCTEKVSGHYVRGSSAVSLQASNYVQHSCVQLIRSLL
REGYQIGQHALCKQYLDKLNLLLRGNLSLGWQLNIQETQELQMCLKQVIRSIKDRALNTS
APVGNNANSTTLPAISIKQEKSAHGGDDLCSPFAVILKEGGGEDGQENLLPRRKSAWEEE
CRDASKSSRSWTSTEGLLVNIKKEHNDLTTQEYVWPQNPLAEKVSEKVQGNRNNDLVAGK
CDLDNQCFNPDAQYSDSRRGGELENKCEAGPGTIMHLAAQTCIGSPEHVYSSDVKESSMS
PSSSSKFKVDVHRLMNLKNMVQKTEWPSKVSQPVKTCDLKKCSLAASASKAEVERPKFCT
GYLCTSKDCHKHWGVNTVHENEISVGTPRSCESTQEKSVNSAFQSRLVPTKRVSKEAPLD
CSSSSKNEPGMQENEDDGILLSGIRDTLLKKVSTEEKSGSLLKSVFKKDADMQTSDQEQP
HLNNLVKYDSKGQISKTFCMDKASANGRVPSSSENKRDISNPASQIRPLSVKCESSDRLF
EFSEYFKRENNSMGKKEEDFAKMVSEDDTLTDSQVDRELGKLSLAAYAKSVNFPFDSGQG
SSVHHNVCDIKRKVKGAVRSSNDSQSTKSPCDADCLDNQVIIISDSSDEEKGVADKEETK
KPNENVCPEKQPSTSSCISDSDSKTESKTPSCHLSLEDCESQYFEFETEFDVFSVWQDTQ
AYSTEATQEYKECVSASVDSSNSDGLLNDHTNEWGYDLDYVSDDAMEEEANLIEKQVENI
SQEKEADNTKEVTNSTLQESISKGDAKDQLENFADKGAVAKDFTLDSRLTEPRPSTSNIS
LASKLALKKNSVSPRKNTAKSKVARTIQRSPKKPPLKTAQNKLLQNTSKNSQPGRSMPAV
VPPRKVRQCPAPVSTVEKLGLKKAPRKAFELSQRSLESITQLRSHGKAAGRVGVVQKQKI
KLIAPQSLSVKHNKKLLACQDLQFFRQTRPQKSVRVKNPAGSSDNRNKKVSKVDARSMKQ
KPKSFELVSLERLVENQREKKREETLCPSPSEIKFESLSVEEATCVSKMPGSSDSNRKSE
DNSMMVPPVPMDSRLSSTALAGDDKDEPSGRGCIVQPECEKTTSRENGCKRNENSEDDDG
LFLTQLDPVDMELCSEEESVQDTARGSEKTEETDTAENLQENESSTVVKCEYKDCIEKVE
KPAEYCSKHSATSSEADHLFAKPSLPLPSKTRKPSTTKTFSSASSSRNAAFSKDLEDVKK
LPPASKSKVNTAKPVVRPPNAKAIPIGNQTRKSPSFSNVPQPCVSNNILQSQNRQNDNAS
NISRRPAREAYYSSFLGAQQRDHRIFVNEVLQWTYEMFANSSQFGPPSDLLQSVAGSVPV
QFQGYNDYFNTFFPLMMLNAFETLAQEWIENQRVREKSYYFCLQNFCADLNTADFTAHFQ
ESDLARQLHPKEDDLIFLVVQKKKDTFREESEMENHIVNHVGLVTRFSRASGCLTRQKEQ
HTICHLSVKTRGNLSFFINKQVKCVVVGSLVTTDRTFKGLLLLSRSPLAKPIINPSYNDF
CPRDLPIASESAASDMNEYNEDQKRAIETAYAMVKQHPGLPKICLIHGPPGTGKSKTIVG
LLSRVLRENIRKEKTTQKTNSKIKPNRFLVCAPSNAAVDELMKKIIVAFKEKCQNRQEPL
GNCGDIKLVRLGAEKAINSEVRGFSLDKQVEHRMKRKPADYDQDIQKKKTALDQKLDMLS
RQRAMYRCEKREVSQMLDDEIGRLSKERQQLASQLKEVRRHSQKVQADIILESDIICCTL
STSGGGLLESAFLRQGLDPFSCVIVDEAGQSCEVETLIPLIHRCNKLVLVGDPRQLPPTV
KSVKAQEYGYDQSLMARLHRHLEEQVRKNVLRSLPVVQLTVQYRMHPDICLFPSNYVYGR
TLKTDKATEENRCSSEWPFQPYLIFDVGDGREERENDSFSNPQEVKLVVELIRTIKEKRK
DLGLRRIGIITPYSAQKKKIQEQLDRVFKNNSPGEVDTVDAFQGREKDCIIVTCVRANST
KGSIGFLASLQRLNVTITRARFSLFILGRLKTLMENKDWNELIQDAQKRGAIIKTSEKSY
RKDAVKILKLNATVQPSTKAGTKKSPLLQACPSSSKRGELANPREAHSSRELAAGAGHAV
PQGSRGPQQPQRAQAADSRRGSTSAPVEAAALPADQEKPRDPRLASMASRTETKGKEQAS
KDSSRSAQSNAGSTSQQGLGVSSAARGQISRTETPKKPQQMMGQYDMPSSLPYAARHEGD
RRAPVSKSSSKAHSEGGQNNSSKWNKDYQVLTRRTSEESPENTESNSAKRRKTSH
NT seq
8448 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgtcgatggtgtacacctagtggttctgacaccactgagttcctgaaaagc
tatgcttctaaacggttgtccccggaagatcttgaaggatccaatgatgatctctgttac
tgcctggagtgtgtggttgaataccacaaagcaagggaaaaattgccaaggttgcatgag
gtcttgtgggagttggaaacctcccgtcttgttgcccacatcaagaaatccatgagggaa
gaagctggagaagatgatgagttgtttatagtggatgagaatggagatacacagctgtct
ggttatgtgggcccagattttgagaataacctgcgagtgcctcttctagaaatactgaaa
tatccatacctgctgctgcatgagaaagtcagtgagctgtgtgtagaagtactctgtaga
atggaacaaggtcacagctcctttcaggtctttgagaaatatccaggaatttatctcttt
ttggtacacccgaatgaagtgattcgtcgatgggctatcctaacagcaaggaatttaggg
aaggttgacagggatgattactatgacttacaggaagtgctgacttgcttgttcaaagtt
attgagttgggtctttttgagagtccagatatttacagcttttcaatgattgaaaggggt
aaactcatccttctgccatctcatttatatgatactgccaactacaagaactattggcta
gggatttgtatgttgctaacagtgttggaagaacaagctatggactccttgttactgggc
ccagacaaacaaaatgatttcatgcagtccatacttcacaccatggagagagaaacagct
gatgattctactgaccccttctggccagcgctgcattgtttcatggttattttggatcag
ctcggatctaaagtatggggtcagcttattgatcctgtccaagcctttcaaaccattatc
aacagtgtgagctacaacaatgaaataaaaaatatacgcagtagctttaagaggacaaaa
tctgaaccggagtcagactacgatgatgacatggttacttgcagtcagattgtgtataat
tataacacagaaaagcctcaaaaggatactggatggaagactgccatttgtccagactac
tgccccaacatgtatgaagatatgcaaacactggctaatgtgcttcagtctgatattggc
agagatatgcgtgtccatgacagcacatttctgtggttcatcccttttgttcagtcgctt
atggatctcaaggacttgggtgtagcatatatagtagaggtcattcactacctctgctcg
gaaatcaaacatattctcaatgaaagaatccagcagtgtgacaaaatctctgaatttttt
ctcctgatcttggtgtcgattattgaactacacagaaataaaaagtgcctgcatttgctg
tggattagctcccaagaatgggtggaagcagtggtgaaatgtgctaagcttccagctata
gcatttacacggtgcactgaaaaagtatctggacactatgtgagaggttcatcagcagta
tctttacaagcttctaactatgtgcagcactcctgtgtgcagttgatacgcagccttctt
agagaaggctatcaaattgggcagcatgctctttgcaagcaatacctagacaaactcaat
cttcttctgcgaggaaatctatctttaggttggcagctgaacatccaggaaacccaggaa
ttacaaatgtgtttaaagcaagttataagaagtataaaggacagagcattgaatacctct
gcacctgtaggaaacaatgcaaactccacaactttgcctgccatttctataaagcaagag
aagagtgcacatggcggagatgacctttgttcaccatttgctgtcatattgaaggaaggt
ggaggtgaagatggtcaagagaaccttctccctagaagaaagagtgcctgggaagaggaa
tgtagagatgcatctaaaagttcaagatcttggacatccacagaaggcctcttggtgaat
attaaaaaggaacataatgacttgacaactcaggaatatgtttggccacagaaccctttg
gcagaaaaagtatctgagaaagttcagggaaataggaacaatgatcttgtggcagggaaa
tgtgatctggataatcagtgctttaatccagatgcccaatattcagattccagaagaggc
ggagagttggaaaacaaatgtgaagcaggaccgggaacaataatgcatctggctgctcaa
acttgtattggttctccagaacatgtttacagctcagatgtaaaggaaagcagtatgtct
cccagttcctcttcaaagtttaaagtagatgtgcatagactcatgaatttgaaaaacatg
gtacagaaaactgaatggccctcaaaagtatcgcagccagtgaagacatgtgacttgaaa
aaatgcagtttagcggcaagtgcttcgaaagcagaggtagagcgacctaagttttgcact
ggctatctgtgtacaagcaaagattgtcataaacattggggagtgaatactgtgcatgaa
aatgaaatctctgttggtactccaaggagttgtgaaagtacacaggagaaaagtgtcaac
agtgcttttcaatccagactagttccaactaagcgggtatcaaaagaagcgccactagat
tgctctagctcctctaaaaatgaacctggtatgcaggaaaatgaagatgatggtattttg
ctttcagggattagagacaccttgctgaaaaaagtatccactgaagaaaaatcaggttca
ttgttgaaatctgtgttcaagaaagatgctgacatgcaaacttcagaccaggaacagcct
catttaaataacttggttaaatatgactctaaaggtcaaatttcaaagacattttgtatg
gataaagcttcagcaaatggtcgtgttccatctagctctgaaaacaagagggatatatcc
aaccctgcttctcagatcaggccactgtcagtgaagtgtgaatcaagtgataggttgttt
gaattttcagagtatttcaagagagaaaacaattcaatggggaagaaggaggaggatttt
gcaaagatggtttctgaagatgatactttaacagactcccaggttgatagagaactcggt
aaattatctttagctgcgtatgccaaaagtgtcaattttccctttgattcaggccaagga
agctccgtacatcataatgtatgtgatattaaaaggaaagtgaaaggtgctgtaagatct
tctaatgatagccaaagtaccaagtctccctgtgatgcagattgccttgacaatcaagtc
attataatttcagactcttctgatgaagaaaaaggtgtggctgacaaggaggaaacaaaa
aaaccaaatgaaaatgtgtgtcctgaaaagcagccttcaacttccagctgcatttctgat
agtgatagcaaaacagaatcaaagactccaagctgtcacttgtcactggaagactgtgag
tctcagtactttgaatttgaaacagaatttgacgtcttttcggtttggcaagatactcaa
gcgtatagtacagaagcaactcaagagtataaggaatgtgtttcagcatcagttgatagt
agtaattcagatggcttactgaacgatcacacaaatgaatggggttatgatctggattat
gtaagcgatgatgccatggaagaagaagcaaacttgatagaaaaacaggtagaaaatatt
tctcaggagaaagaagctgataatacaaaagaagtaacgaattcaacattgcaagaatct
attagtaagggagatgcaaaagatcaactggagaattttgcggacaaaggcgctgttgct
aaagacttcaccctggactcaagattgactgaacccagaccatctacatctaacatctca
ttagcttcaaagttggcccttaagaaaaatagcgtgagcccacggaagaacacagcaaaa
tctaaggtagcaagaactattcaaagaagtcctaaaaaacctcctcttaaaacagcacaa
aataaactacttcaaaatacatcaaaaaattctcaacctggcaggtcaatgcctgctgtg
gttcctccaaggaaagttcgacagtgtcctgcaccagtgtcaactgtagaaaaacttggt
ctgaaaaaggcaccccgcaaagcgtttgagttatcccagcgctctttagagagcataact
caattgcgcagccatggtaaagctgcagggagagttggagttgtacagaaacagaagatt
aaactaattgctcctcagagtttgtctgtaaagcataataaaaaattgctagcctgccaa
gaccttcagttttttaggcagacaaggccccagaaaagtgtcagagtgaaaaatcctgca
ggaagttctgacaacagaaacaaaaaagttagcaaagtggatgcaagatctatgaaacaa
aagcctaaaagttttgaactggtatctcttgaaagattggttgaaaaccaaagagagaaa
aaaagggaggagactctttgtccctctcccagtgagataaaatttgaaagcctctctgtg
gaggaggccacctgtgtctctaaaatgcctggttcttcagactcaaacagaaaatcagag
gataacagtatgatggttcctcctgtacctatggattcacgtctctcttccactgcactt
gctggagatgataaagatgaaccttcgggaagaggttgtattgtccagcctgagtgtgag
aagacaacttcaagagaaaatgggtgtaaacgaaatgaaaacagtgaagatgatgatggt
ttatttttaactcagttagatcctgtggatatggaattatgttctgaggaggaaagtgtt
caagatactgctagaggtagtgaaaaaacagaggaaacggacactgctgaaaaccttcag
gagaatgaatcctcgactgttgtgaaatgtgaatacaaagactgtatcgaaaaagtggaa
aaaccagcagagtactgtagtaagcattcagccaccagctcagaagcagatcacttgttt
gctaaaccttctctcccgctgccttctaaaacaagaaagccttccactaccaaaactttc
agctcagcaagttcttcacggaatgcagccttcagcaaggatctagaagatgttaaaaag
ctaccgccagcttcaaaaagcaaagtgaatacagcgaaaccggtggtcaggccaccaaat
gcaaaggctataccaataggaaatcaaacacgcaagtctccaagtttcagtaacgtacct
caaccctgtgtttctaataacattctccagtcacaaaatagacagaacgacaatgcttca
aatatttccagaaggcctgcccgagaagcatattattcttcctttcttggcgctcagcag
cgtgatcataggatttttgttaatgaagtcctacagtggacttatgaaatgtttgcaaac
tccagccagttcggacctccaagtgatctcctgcagtctgtagcaggctctgttcctgtc
caatttcagggatacaatgactattttaatacatttttccccttgatgatgctaaatgcc
tttgaaacactggcacaagagtggatagaaaaccagagagtgagagagaagagttactac
ttctgcttacagaacttctgtgctgacttgaatacagcagattttacagctcattttcaa
gaaagtgatttggcaaggcagcttcatccaaaggaggatgacttaatctttttggtggtc
caaaagaaaaaagacacctttagggaagaaagtgagatggagaaccatatagtgaatcac
gttggtcttgtgacacgattttctcgtgcatctggctgtttaactagacaaaaggagcag
cataccatctgtcatctttctgtgaaaactcgaggcaatttgtcattcttcataaataag
caagtgaagtgtgtggtggttggatccctggtgaccacagaccgaacattcaagggccta
ctactattgagcaggagtcccctggctaaacccatcataaatccaagttacaatgacttc
tgtcccagagatttgcccatagcttcagaaagtgctgcatcagatatgaatgaatacaat
gaagatcaaaagagagccattgagacagcttatgccatggtaaagcaacatccagggctt
cccaagatctgcctcatccatggtccacctggaacagggaaatcaaaaactattgttgga
cttctgtctcgtgttttgagagaaaacattaggaaggagaagacaactcaaaaaacaaat
tccaagatcaagccaaaccgttttctagtttgtgcaccatcaaatgctgctgttgatgaa
ctcatgaaaaagatcatcgtggcatttaaggaaaaatgccaaaacagacaagagcctttg
ggaaactgtggtgatatcaaattagtgcgacttggtgctgaaaaagcaatcaacagtgaa
gtccggggatttagcctggataagcaagttgaacatagaatgaaacgaaagccagctgac
tatgaccaggatattcagaagaaaaaaacagctctggatcaaaagctggacatgctgtct
cgtcagcgtgctatgtacagatgtgagaagagggaggtgagtcaaatgttagatgatgaa
attggcagactttcaaaggagagacaacagcttgcttctcaactaaaggaggttcggagg
cactcgcagaaagtacaggcagatatcatcttggagtccgacataatctgctgcacgctg
agcacaagtggaggaggtctgctggaatccgcttttttgcggcaaggccttgatcctttc
agctgtgtcattgtggatgaggcagggcagtcctgtgaggttgaaacactgattccactg
atccatcgctgtaataaacttgtccttgttggagatcccagacagctccctcctactgta
aaatcagtaaaagctcaggaatatggctacgatcagtccttgatggcacgtctgcacaga
cacctggaggagcaagtgcggaagaatgttttacgaagcctgccagttgtgcagctgact
gtgcagtataggatgcaccctgacatctgcctcttcccatccaattacgtttatggcagg
actctaaagactgacaaagcaacagaagagaacagatgttcttcagagtggccattccag
ccctaccttatttttgatgtaggagatggtcgtgaggagcgagagaatgactctttcagt
aatcctcaggaagtgaagctggtggtggaattaattagaacaattaaagaaaaaaggaag
gatctgggtcttcgtcgcattggaataattaccccttacagcgcacagaaaaagaaaatt
caagaacaactggacagagtgtttaagaataacagcccaggagaagtggacacagtggat
gcattccagggacgagagaaagactgcatcatagtgacatgtgtccgggcaaacagcact
aaagggtcaattgggtttctggcgagtcttcagcgtctgaacgttacaattacccgagcc
agattcagcctctttatccttggaagactgaaaacgctcatggaaaataaagactggaat
gagttgattcaggatgctcagaaaagaggtgccattatcaagacatcagaaaaaagctac
aggaaagatgctgttaagattttgaagctcaacgcaacagtacagccctcaaccaaagca
gggacaaagaaatctcctctgttgcaggcttgtccttccagtagcaagaggggtgagctt
gcaaatccaagggaggcccacagctcacgggaactcgctgctggtgctggccatgcagtg
ccacaaggaagcagagggccccaacagccacagagggctcaggctgcagactccaggaga
ggcagtacctccgcaccagtggaggctgcagcgcttcctgctgatcaagagaaaccacgg
gacccaaggctggcaagtatggcgagtagaactgaaacaaaagggaaggagcaggcctca
aaagacagcagtcggtcagcccagagcaatgcaggatcaacgtcacagcaaggcctcggt
gtgtcctcggctgccaggggtcagatttccagaacagaaactcctaagaagccccagcaa
atgatggggcaatatgacatgccttcctcgttgccttacgcagctcggcatgagggtgac
cggagagctcctgtatcgaaaagcagttcaaaagcccacagtgaaggaggtcaaaataat
agcagtaagtggaacaaagactatcaagttttaacgaggagaacatcagaggaatcacca
gagaacacagaatcaaacagtgccaagcgaagaaagacctctcactga
DBGET
integrated database retrieval system
