Haliaeetus leucocephalus (bald eagle): 104834076
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Entry
104834076 CDS
T08630
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03020
RNA polymerase
hle03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104834076 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
104834076 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hle03021
]
104834076 (POLR2A)
03400 DNA repair and recombination proteins [BR:
hle03400
]
104834076 (POLR2A)
Enzymes [BR:
hle01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104834076 (POLR2A)
Transcription machinery [BR:
hle03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104834076 (POLR2A)
DNA repair and recombination proteins [BR:
hle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104834076 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
104834076
NCBI-ProteinID:
XP_010569467
LinkDB
All DBs
Position
Unknown
AA seq
1802 aa
AA seq
DB search
MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDS
NNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGH
GGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPK
FARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFEKMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLV
IVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQGTVVAEDQEWVNVYYEMPD
FDVSRISPWLLRIELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYPPTAPHRPATAPRHPPTASPARPSAPTTATRTTEPGRGTPKNPRRL
WG
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtgggccgccttcgggcgacagcgcttgcccattacgcactatcaaacgagtc
cagttcggcatcctcagccccgatgagatgaaacggatgtcggtgactgaggggggcatc
aagtaccctgaaacgacggagggggggcgccccaaactcggggggctcatggacccccgt
cagggtgtcattgagaggacggggcgctgccagacctgtgccggtaacatgacagagtgc
ccaggccactttggtcacattgagctggccaagcctgttttccacgtgggctttttgggc
aagaccatgaagatcctgcgttgtgtctgcttcttctgttccaaactgctggtggactcg
aacaaccccaaaatcaaggatattttggggaaatcgaaggggcaacccaagaagcggctg
acgcacgtctacgacctctgcaaggggaagaacatctgcgaggggggcgaagagatggac
cacaaatttggggtggagcagcctgagggtgatgaggacctcaccaaggagaagggccac
ggagggtgcgggcgataccagccccgcatccgtcgctcgggtttggagctctatgccgag
tggaagcacgtcaatgaggattcgcaggaaaagaagatcctgctcagtcctgagcgggtg
cacgagatcttcaagcgcatctcggatgaggaatgcttcgttttgggcatggatcccaaa
tttgcccgccctgagtggatggtctgcactgttctgcctgtaccccccctctctgtgcgc
cccgctgtcgtcatgcagggttctgctcgtaatcaggatgacctgacccacaaactggcc
gacattgtgaagatcaacaaccagctacgccgtaatgagcagaacggggcggccgcccac
gtcattgctgaggatgtcaaactcctccagttccacgtggccaccatggtggacaacgag
ctgcccggcctgccacgggcgatgcagaagtcggggcgtcccctgaagtccctgaagcag
cggttgaaggggaaggagggtcgggtgcgggggaacctgatggggaagcgggtggatttt
tctgcccgcaccgtcatcacccctgaccccaacctggccatcgatcaagtgggcgtcccc
cgctccatcgccgccaacatgaccttcgccgaaatcgtcacccccttcaacatcgacagg
ctgcaggagctggtgcgccggggaaacagccaataccccggggccaagtacatcatccgg
gacaacggggaccgcattgacctgcgcttccaccccaaacccagtgacctccacctccag
atcggctacaaggtggagagacacatgtgtgacggggacatcgtcatcttcaaccgccag
cccaccctacacaagatgtccatgatgggccaccgtgtccgcatcctgccctggtccacc
ttccgcctcaatctcagcgtcaccaccccctacaacgcggatttcgatggggacgagatg
aacctccacctcccgcagtccctggagacgcgagccgagatccaggagttggccatggtc
ccccgaatgattgtcaccccccaatccaaccgtcctgtcatgggcatcgtccaggacacc
ctcactgccgtccgcaagttcaccaagcgtgatgtcttccttgagcgtggggaggtgatg
aacctgctgatgttcctctcgacatgggacgggaaggtgccccaacctgccatcttgaaa
ccccgtcccctctggacgggcaaacagatcttctccctcatcatccctggacatatcaac
tgcatccgcacccacagcacccaccccgatgatgaggacagcgggccctacaagcatatc
tcccctggggacacaaaggtggtcgtggagaacggggaactgatcatgggcatcctctgc
aagaagtcgttgggcacctcagcgggttccttggtccatatttcctacctggaaatggga
cacgacactacccgcctcttctacagcaatatccaaactgtcatcaacaactggctcctc
attgagggccacactatcggcattggagactccatcgctgatgcaaagacctaccaggac
atccagaacaccattaagaaagccaagcaggatgtcatagaggtcattgagaaggcccac
aacaacgagttggagcccaccccgggcaacacactgcggcagacctttgagaaccaggtg
aaccgcatcctcaacgatgcccgtgacaagactggttcctctgcccagaagtccctctct
gagtacaacaacttcaagtccatggtggtgtcaggcgccaaaggctccaagatcaacatc
tcccaggtgattgcagtggtggggcagcagaacgtggagggtaagcggatccccttcggc
ttcaagcaccgcacgctgccccacttcatcaaggatgattatggccctgagagccggggc
ttcgtggagaactcctacctggctggcctcacccctactgagttcttcttccacgccatg
ggtggccgtgagggtctcatcgacaccgctgtcaagacggctgagaccgggtacatccag
cggcggctgatcaagtcaatggagtcggtgatggtgaagtacgacgcgacggtccgtaac
tccatcaaccaggtggtgcagctgcgctatggggaggacgggctggcgggcgagagcgtc
gagttccagaacctggccaccctcaagccctccaacaaggctttcgagaagaagttcaag
ttcgattacaccaacgagcgggcgctgcggcggacgctgcaggaggagctggtcaaggac
atcctctccaacgcccacatccagaacgagctcgagcgggagttcgagaagatgcgggag
gaccgtgaggtcctgcgggtcatcttccccactggtgacagcaaggttgtgctcccctgt
aacctgctgcggatgatctggaacgcccaaaaaattttccacatcaactcgcgcctcccc
tctgacctgcaccctgtcaaggtggtggagggggtgaaggagctgagccgtaagctggtg
atcgtgaacggggacgacccgctgagccggcaggcacaggaaaacgccacgctgctcttc
aacatccacctccgctccaccctctgcagccgccgcatggtggaagagttccggctcagt
ggggaggcctttgactggctgctgggggagatcgagtccaagttcaaccaggcgatcgcc
caccctggggagatggtgggggcactggcagcccagtcgctgggagagccagccacccag
atgaccctcaacaccttccactacgccggggtctcagccaagaacgtcaccctgggcgtc
ccccgcttgaaggagctcatcaacatctccaagaagcccaagacaccctcactcaccgtc
ttcctgctgggccagagcgcccgcgatgccgagcgggccaaggacatcctgtgccgcctg
gagcacaccacgctgcggaaggtgacggccaacaccgccatctactatgaccccaaccct
cagggcacggtggtggccgaggaccaggagtgggtcaacgtctattacgagatgcctgac
tttgacgtcagccgcatctcaccctggctgctccgcatcgagcttgaccgcaagcacatg
actgaccgcaagctcaccatggagcaaatcgctgagaagatcaatgctggctttggggat
gacctcaactgcatcttcaatgatgacaatgcggagaagctggtgctgcggatccgcatc
atgaacagcgatgagaacaagatgcaggaggaggaggaggtggtggacaaaatggatgac
gacgtcttcttgcgctgtattgagtccaacatgctgacggacatgacgctccagggcatc
gagcagatcagcaaggtgtacatgcacctaccacagacggacaacaaaaagaaaatcatc
atcacagaggatggggagttcaaggctcttcaggagtggatcctggagactgacggcgtc
agcctcatgcgggtgctgagcgaaaaggacgtggaccccgtccgcaccacctccaatgat
atcgtcgagatcttcaccgtgctggggatcgaggcggtgcggaaggcgctggagcgggag
ctctaccacgtcatctcctttgatggttcctacgtcaactaccgtcacctggccctgctc
tgtgacaccatgacctcccgtgggcacctgatggccatcacccgtcacggcgtcaaccgc
caggacactgggcccctcatgaagtgctccttcgaggagacggtggacgttctgatggag
gcagcggctcacggggagagcgaccccatgaagggggtgtcggagaacatcatgttgggt
caactggcgcccgctggcaccggctgcttcgatctcctcctcgacgctgagaaatgcaaa
cacggaatggagatccccagcgccctcccggggctgggcgtcggggggcccacagggatg
ttcttcgggtcggcccccagccccatgggggggatgtcccccgccatgacaccgtggaac
cagggtgccacccccgcctacggggcctggtcccccagtgtaggtagcggcatgaccccg
gggggtgccggcttctcccccagcgccgcctccgatgccagtggcttcagccccggctac
tccccagcgtggtcgcccacccctggctctcccggctccccggggccctccagcccctac
atcccctccccaggcggcgccatgtcacccagctacagcccgacatcacctgcctacgag
ccgcgctcacctgggggctacaccccacagagccccagctacagcccgacgtcgcccagc
tacagcccgacgtcgcccagctacagcccgacatcgcccaactacagcccgacgtcaccc
agctacagcccaacatcacccagctacagcccgacctcacccagttacagcccgacctcg
cccagctacagcccaacatcacccagctacagcccgacttcccccagttacagtccgacc
tctcccagttacagcccgacgtcacccagttacagccccacctcgcccagttacagcccg
acatcacccagttacagccccacctcacccagttacagtccgacatctccgagttacagc
ccgacttcccccagctacagcccaacctctcccagttacagccctacttctcccagttac
agccccaccagccccaactacagccccaccagccccaactatccacctacagccccacat
cgcccggctacagccccacgtcacccacctacagcctcaccagcccggccatcagccccg
acgacagcgacgaggacaactgagccggggagagggacccctaaaaacccccgcaggctg
tgggggtga
DBGET
integrated database retrieval system
