Haliaeetus leucocephalus (bald eagle): 104835533
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Entry
104835533 CDS
T08630
Symbol
LIG3
Name
(RefSeq) DNA ligase 3 isoform X1
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104835533 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hle03400
]
104835533 (LIG3)
Enzymes [BR:
hle01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
104835533 (LIG3)
DNA repair and recombination proteins [BR:
hle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
104835533 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
aRib
Motif
Other DBs
NCBI-GeneID:
104835533
NCBI-ProteinID:
XP_010571861
LinkDB
All DBs
Position
Unknown
AA seq
994 aa
AA seq
DB search
MPTGSRTLSQAVRVLGRGTGLFSPHTQVSLPRPYLCCVGLPEASPSYWSQLLLRRVSLQS
TDRNQGGSAGAFHFSLLLNTWLRQACTAAEDMAEQRYCVDYAKRGTAGCKKCKEKIVKGM
VRIGKIVPNPFTESGGDMKEWYHVKCMFEKLEKARATTKKIEDITDLEGWEELQDGEKEL
INKHISEANSKAASTPKKKVIVQAKLTATGQLTTKDPLALIAPSPKKFSGFTAKPKNSED
ISANFSHKSSLSAKKCDPKHKDCLLREFRKLCAMVAEKPSYNVKTQIIQDFLKKGSGGDG
FHGDVYLTIKLLLPGVIKIVYNLNDKQIVKLFSRIFNCSQEEMVRDLEQGDVSETIRLFF
EQSKSCPPAAKSLLTIQEVDDFLIQLSKLTKEDDQQSVLQHITRRCTGNDLKCIIRLIKH
DLKMNAGAKHVLDALDPNAYEAFKASRNLQDVVERVLKNQQEAEKMPGLKRTLSVQASLM
TPVQPMLAEACKSIEYAMKKCPNGMYAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV
AHFKDFIPKAFPGGQSMILDSEVLLIDNKTGRPLPFGTLGVHKKAAFQDANVCLFVFDCI
YFNDISLMDRPLCERRKFLHDNMVEIPNRILFSEMKHVTKASDLADMITRVIREGLEGLV
LKDTKGNYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDP
KSEKWCTVTKCSGGHDDATLARLQTELDMVKISKDPSKIPRWLKINKIYYPDFIVPDPKK
APVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLQQLKELYQLSKEKADF
SVAAGEEDESTAGSSGENEGNSRSSTPHSTIKTPPSKSPAKAQKPEESKAVIGSPEKSEE
KRGEKRKASEMDDNGKKTLLDIFTGVKLYLSPSVKDFDKIRRYFIAYDGDLVPEFDTASA
THVIGDIDENPGAKRVSPNWIWECIRKRRLVAPC
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcccacaggcagccggacactatcacaggctgtccgggtactcggcaggggcacagga
cttttctctccacacacacaggtttctctgccaagaccctacctttgctgtgttggcctt
cccgaggccagccccagttactggtcccagctgctgttacggcgtgtatctctccagtcc
acagacagaaaccagggtggcagtgctggggctttccatttctccctgcttttgaacact
tggcttcgccaggcctgcacagcagcagaggacatggcagagcagaggtactgcgtagat
tatgctaagcgtggcacggcaggctgcaagaaatgcaaggagaagattgtgaaaggaatg
gtgcgcattggaaagattgttcccaatcctttcacggagtctggtggggacatgaaggag
tggtaccatgtgaagtgcatgtttgagaagctagagaaggcccgggccaccacaaagaaa
attgaagacatcacagacttggaagggtgggaagaactacaagatggggagaaagaatta
atcaacaagcacatctcagaagctaattccaaggctgcaagtacaccgaagaaaaaagtg
atagtccaagccaagctcactgccacaggacaactaactacaaaagatccattagctctc
attgctccatcaccaaagaagttctctggcttcacagccaagccaaagaattcagaagat
atctctgcaaacttttcccacaagtctagcctatctgcaaaaaaatgtgatccgaagcac
aaagactgcttgctgcgagagttcaggaagctttgtgccatggttgctgaaaagcctagc
tataatgtgaaaacacagatcatccaggattttctgaagaagggatctggaggagatggt
tttcatggtgatgtatacctgaccattaagctgctgttgccaggcgtcattaaaattgtt
tacaacttgaatgataagcagattgtaaagctgtttagtaggatttttaactgcagccaa
gaagaaatggtccgggacctggaacagggagatgtttccgagaccatacgcctcttcttt
gaacagagcaagtcttgtcctccagcagccaaaagtctcctgaccatccaagaggtagat
gatttcctcatccagctatcaaagcttactaaggaagatgaccagcaaagtgtgctgcaa
catatcactcgcagatgtacgggcaatgacctgaaatgcatcatcaggctaatcaagcat
gacttgaaaatgaatgctggagcaaagcatgtgttggatgctttggatcccaatgcttat
gaggcgttcaaagcatcacgcaacctccaggatgtggtagagcgagtcctgaagaaccag
caggaggctgagaagatgccaggtctgaagcgaaccctcagtgtgcaggcctctctgatg
accccggttcagcccatgctggctgaagcctgcaagtcaattgagtatgccatgaagaag
tgcccaaatggcatgtatgcagagatcaaatatgatggcgagcgggtgcaggtccataaa
aatggagatcatttcagctacttcagcagaagcctcaaacctgtcctcccacataaagta
gcccattttaaggacttcatcccaaaggctttccctggtgggcaaagtatgatcctggat
tcagaagttcttctgattgacaacaaaactggcaggccacttccttttgggactcttggt
gtgcacaagaaagctgctttccaagatgccaacgtttgcttgtttgtgtttgactgcatc
tatttcaatgacatcagcctgatggacaggcctctgtgtgaacgtcgtaagtttctccat
gataacatggttgaaatccccaaccggatcctcttctcagagatgaagcatgtcacaaaa
gcttcagatctggcagatatgatcacccgagtcatccgtgagggactggaaggactggtg
ttgaaagatacaaagggtaattatgaaccgggaaaacgacactggctgaaagtgaaaaag
gactacttaaatgagggtgcaatggctgacacagcagacctagtggtgctgggagctttc
tatggacaaggcagtaaaggtgggatgatgtccatcttcctcatgggctgctatgatccc
aagagtgagaagtggtgcactgtgaccaagtgttctggtggccatgatgatgccaccctg
gcacgtctgcaaacagagctggatatggtgaagatcagcaaggatcctagtaaaattcca
aggtggctaaaaattaacaaaatctactacccagacttcattgtcccagatccaaagaaa
gccccagtgtgggagatcacaggggctgaattctctaaagccgaagcccacactgcagat
gggatctccattcgcttccctcgctgcacccgcattcgagatgacaaagactggaagaca
gccaccaacctccagcagcttaaggagctgtaccaactctccaaagagaaggctgatttc
agtgtagctgctggggaggaagatgagtccacagctggcagcagtggagagaatgaggga
aattccaggtcttccacaccacacagcactattaaaactcccccaagcaagtcacctgca
aaagcccagaagccagaagaaagcaaagcagtcattggatcccctgaaaaatcagaggag
aaacgaggagagaagcgaaaagcatctgagatggatgacaatggaaaaaagacattgctg
gacatattcactggtgtgaagctgtacctgtcgccctctgtgaaggacttcgacaaaatc
cgacggtactttatagcatatgatggggatcttgtgccagagtttgacacagcctcagca
acgcatgttataggggacattgatgagaatcctggtgctaagcgtgtgtctcccaactgg
atctgggaatgcatccggaaacggagactggtagccccatgctag
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