Haliaeetus leucocephalus (bald eagle): 104836145
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Entry
104836145 CDS
T08630
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03030
DNA replication
hle03410
Base excision repair
hle03420
Nucleotide excision repair
hle03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104836145 (RFC1)
03410 Base excision repair
104836145 (RFC1)
03420 Nucleotide excision repair
104836145 (RFC1)
03430 Mismatch repair
104836145 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hle03032
]
104836145 (RFC1)
03400 DNA repair and recombination proteins [BR:
hle03400
]
104836145 (RFC1)
DNA replication proteins [BR:
hle03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
104836145 (RFC1)
DNA repair and recombination proteins [BR:
hle03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
104836145 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_14
Rad17
AAA_22
BRCT_2
AAA_5
AAA_30
RNA_helicase
RuvB_N
AAA_18
AAA_16
AAA_17
AAA_33
AAA_7
nSTAND3
NTPase_1
AAA_19
Motif
Other DBs
NCBI-GeneID:
104836145
NCBI-ProteinID:
XP_010572843
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MAATHEGSDANQDIRKFFGVVPPGKRQACDTVKKSEKIKNGEGSSGGKKREKETKVNNSP
SEDDSKQKRTNKKKRIIYDSDSEEEVQSVKKSKKPSEKKAATSKLGKVLKQHPVVYISET
DEEDDFVNKRISLKPKENGTSAIGCPGTTVKKEDVKPRAKSKPLSPVKQTPTSALDYFGT
SSVQRSEKKLVASKRKEPSQSRDSTLDDEAIARQLQVEEDSELERQLHEDEEFAKTLAML
DETPQKKKARKDSGGEQTVLSIKSSPNVTERDKQSQRVKATNSTGEAKNYAVKQQTKSEH
SKGSRLSPQSSDGKIPRELMDKTLPLKPSSKLLSLKQKEEIAEKERGAQSLVSKEKTSSG
KEEKTTPKKEKISPKKTESVSPEDSEKKRNNYQAYRSFLNREGPKALGSKEIPRGAENCL
EGLTFVITGVLECIERDEAKSLIERYGGKVTGNVSKKTNYLVMGRDCGQSKCEKASTLGT
KVIDEDGLFDLIRTMPGKKSKYELAAETEAKKAESRPKKTPQKAEAGKRNFSPFKREADN
KRYKSTPEKGDTVKSVKKETTAVRKLMDFKWQTVEKKEAPKPEGNLVSETNEDGTERLLW
VDKYKPVSLKAIIGQQGEQSCANKLLRWLRNWHKSTSEDGQAKTNKTGGKDDGTGFKAAL
LSGPPGVGKTTTASLVCKELGYSYVELNASDTRSKNSLKEVVAESLNNTSIKDFCSGTSS
SVSGKHVLIMDEVDGMAGNEDRGGIQELIGLIRNTKIPIICMCNDRNHPKIRSLVHYCFD
LRFQRPRLEQIKGAMMSIAFKEGLKIPPPAMQEIILAANQDIRQVLHNLNMWCAKDKSLT
YDEAKTDASRAKKDLKLGPFDVVRKVFATGEEASRMSLIDKSDLFFHDYSLAPLFVQENY
VHVKPAAAGGNLKKHLVLLSRAADSICDGDIVDKQIRSKQNWNLLPTQAIYASVLPGELM
RGYMSQFPVFPSWLGKFSSTGKHDRIIQELAMHMSLRTQTCKRTVNMEYLPYLRDAVVQP
LKDFGADGVQEAITFMDSYCLMKEDIENVMEISTWGGKPSPFSKLDPKVKAAFTRAYNKE
AHLTPYSLNSVKPSKRQSGSVVTSELNEDLNVEEIQSDEDEQDTVESDAMIKQKKAKSSK
LPKREKNEETTKKEGKRKEKTRH
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacccatgaaggtagtgatgctaaccaggatatccggaaattctttggtgtt
gtacctcctggaaagcgacaagcatgtgacactgtgaaaaagagtgaaaaaattaaaaat
ggcgaaggatcctcaggtgggaagaaaagggaaaaggagactaaggtgaataattcaccc
agtgaagatgattccaaacaaaagcgaacaaacaagaaaaaaagaataatctacgattca
gattcagaagaggaggtgcagtcagtgaaaaaatccaagaagccatctgagaaaaaagca
gctacttcaaaacttggtaaagttctaaagcagcatcctgttgtttatatttcagagaca
gatgaagaagatgactttgtcaataaaagaatttccctgaaaccaaaggagaatgggaca
tcagcaattggttgtcccggaactacagtgaaaaaggaagatgtaaaaccacgagctaaa
agcaaaccattatctccagtgaaacagactcccacctcggcacttgattactttgggaca
agtagcgtccaacgatcagaaaagaaactggtagcaagtaaaaggaaagaaccttcacaa
agcagagacagcacactagatgatgaggccattgctaggcaactgcaggttgaagaagat
tcagagctggagagacagctgcatgaagatgaagaatttgctaaaactttggccatgttg
gatgaaacaccacagaagaaaaaggctcggaaagattcaggaggagagcaaacagtattg
agcatcaagagcagtcctaacgtgacagaaagagataagcagtcacaaagagtgaaagca
acaaactcgacaggtgaagcaaagaattatgctgtgaagcagcaaactaaatctgaacat
tcaaaaggctctcgtttatccccacaatcatctgatggtaaaataccaagagagttgatg
gataagaccttgcctttgaaacctagctctaagcttctgtctctgaaacaaaaagaagag
attgctgaaaaggaaagaggtgctcaaagtttagtatcaaaagaaaaaacttcttcaggg
aaagaagagaagacaacaccaaagaaggagaaaatttctcccaagaagactgagtctgta
agtcctgaggactctgaaaagaagcgaaacaattatcaagcctaccgaagcttccttaat
cgtgagggtccaaaagcactgggttccaaagagatacctcggggagctgaaaactgcttg
gaaggcctgacatttgtaattacaggcgtactggagtgtattgaaagagatgaggccaag
tctctgattgaacgttatggaggaaaagtgactggcaatgtcagcaagaagacaaactat
ctggtcatggggcgagactgtggccaatctaaatgtgaaaaggcatcaactttagggaca
aaagttattgatgaggatggcctgtttgatcttattcgaactatgccaggcaaaaagtcc
aaatatgagctggcggctgaaacagaggcaaagaaagcagagtcaagacctaaaaagaca
ccacagaaagctgaagctggaaaaaggaattttagtcccttcaaaagggaagccgataat
aaaagatacaagtctactcctgaaaaaggagatactgtcaaatctgttaagaaggaaacc
actgctgttcgaaagcttatggactttaaatggcagactgtagagaagaaagaagccccc
aaacctgaggggaacttggtttctgagactaatgaagatggaacagagagattgctatgg
gtagataaatacaagcctgtatctcttaaggcaataattggacagcagggtgagcaaagc
tgtgccaataaactgctccgatggctcagaaactggcacaagagtacctcagaagatgga
caagcaaagaccaataaaactggaggcaaagatgatggtactggttttaaagcagcatta
ctttctggtccgcctggagttggtaaaactactacagcttctttggtttgtaaggaactg
gggtatagctatgtggagctgaatgccagtgacactcgcagtaagaacagtctaaaggaa
gtagttgctgaatcacttaacaacaccagcatcaaagacttctgttctggcacatcctca
tcagttagcgggaaacatgtattgatcatggatgaagtggatggtatggcaggcaatgaa
gacagaggagggattcaggagttgattggtttaattagaaatacaaagatacccatcatc
tgtatgtgtaatgatcgaaaccatcctaaaattcgttccttggtccactactgttttgat
cttcgttttcagagacctcgtctagaacagattaagggtgccatgatgtctattgcgttt
aaagaaggtttaaaaattccaccacctgctatgcaagagataatcctggcagcaaatcag
gacatcagacaggttttacataatcttaatatgtggtgtgcgaaagataaatcattgact
tacgatgaggctaaaacggatgccagcagagccaaaaaggatctcaaactgggccctttt
gatgttgtccggaaggtttttgctactggagaggaggcttctcgtatgtctcttatagac
aaatcggatcttttcttccatgattattccctagcacctctctttgtccaagagaactat
gtacatgtgaaaccggctgctgctggaggaaatctgaaaaagcacttggtgctcttgagt
agagcagctgatagtatatgtgatggtgacatagtggacaaacagattcgtagcaagcaa
aactggaaccttcttccaacacaggctatttacgccagtgttctcccgggggagctgatg
agaggttacatgtcccagtttcctgtctttcccagctggctggggaagttttcatccaca
ggcaaacatgatcgtatcattcaagaactggcaatgcacatgagtctcagaacccagacg
tgcaagaggacagtaaatatggagtatttgccatatctgcgggatgcggttgtccagccc
ttgaaagactttggagcagatggtgtacaagaagctataacgttcatggactcttactgc
ttgatgaaagaagatattgaaaatgtcatggaaataagcacatggggaggcaaacccagt
cctttttcaaagttggatcccaaggtcaaagcagcttttacacgtgcctacaacaaagag
gcacatctgactccatattcacttaattctgtcaagccatctaaaaggcagtcaggatct
gtggtgacctcagaactgaatgaagacttgaatgtggaagagatccagtctgatgaggat
gagcaagatactgttgaaagtgatgcaatgattaagcaaaaaaaggcaaagtcttccaag
ctgccaaaaagagagaaaaatgaagaaacaacaaaaaaagaagggaaaagaaaagagaaa
acaagacattaa
DBGET
integrated database retrieval system