Haliaeetus leucocephalus (bald eagle): 104836575
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Entry
104836575 CDS
T08630
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104836575 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104836575 (XAB2)
03041 Spliceosome [BR:
hle03041
]
104836575 (XAB2)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104836575 (XAB2)
Spliceosome [BR:
hle03041
]
Complex B
Other components
Prp19-related factors
104836575 (XAB2)
Complex C
104836575 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
HAT_PRP39_C
TPR_19
TPR_2
TPR_7
TPR_12
TPR_15
TPR_8
Suf
TPR_1
PPR
Motif
Other DBs
NCBI-GeneID:
104836575
NCBI-ProteinID:
XP_010573543
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MAGTSGTGGDIGNTAGDIGDAGDTGGTLGTLRTLAITCVTVSPLVPITCVTVSPLVPITR
AREEEDVQHEEEILRNPFSVRCWLRYAQARQKGPRHRLNLLFERALRELPGRWGGHPQGD
LGDMLEWEDGDILGMPRIWLDYCQFLVDQGRITRTRRTFDRALRALPITQHHRIWPLYLQ
FVRRYPLPETAVRVYRRYLKLSPESAEEYVEYLRSVGRLDEAAVRLARLVNDERFVSKEG
KSNYQLWQELCELLSQHPERVRSLDAGAIIRGGLTRFTDQLGRLWGALADCYIRSGHFEK
ARDVYEEAVQTVMTVRDFTQVFDSYAQFEESVIAAKMETVAELGKEEDEEVELELRLARF
EQLMARRPLLLNSVLLRQNPHNVHEWHKRVQLYQGRPEQIINTYTEAVRTVDPFKATGRP
HGLWVAFARFYEDNGQLDD
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggggacatcagggacagggggggatattgggaacactgcgggggacattggggat
gctggggacaccggggggacgctggggacattgagaacactcgccatcacctgtgtcaca
gtgtcacctctcgtccccatcacctgtgtcacagtgtcacctctcgtccccatcacccgt
gccagggaggaggaggacgtgcagcacgaggaggagatcctgcgcaaccccttctcggtg
cggtgctggctgcgctacgcccaggcccggcagaaggggccgcgccaccgcctcaacctc
ctcttcgagcgcgccctcagggagctgcccggcaggtgggggggacacccacagggggac
ctcggggacatgttggagtgggaggacggggacatcctgggtatgccccgcatctggctg
gattactgccagttcctggtggatcagggccggatcacacggacgcgccgtaccttcgac
cgggctttgcgggcgctgcccatcactcagcaccaccgcatctggcccctctacctccag
ttcgtccggcgctaccccctgcccgagaccgccgtccgcgtctaccgccgttacctgaag
ctgagccccgagagcgcggaggagtacgtggagtacctgcgctccgtgggtcgcctggac
gaggccgctgtgcgcctggctcgcctcgttaacgacgagcgcttcgtctccaaggagggc
aagtctaattaccagctgtggcaggagctgtgtgagctgctctcccagcacccggagcgg
gtgcgctcgctggacgcgggtgccatcatcagggggggactgacccgcttcaccgaccag
ctgggccggctctggggagccctggccgactgctacatccgcagcggccacttcgagaag
gcccgggatgtctacgaggaggcagtgcagacggtgatgacggtgcgggacttcacccag
gtctttgacagctacgcccagttcgaggagagcgtcattgccgccaagatggagacagtt
gcggagctgggcaaggaggaggacgaggaggtggagctggaactgcggctggcccgcttt
gagcagctgatggcccggcgcccgctgctgctcaacagcgtcctgctgcgccagaacccc
cacaacgtccacgagtggcacaagcgggtgcagctctaccagggacgtcccgagcagatc
atcaacacctacacagaggccgtccgcaccgtggaccccttcaaggcaacggggcgcccg
catgggctgtgggtggccttcgcccgcttctacgaggacaacgggcagctggatgat
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