KEGG   Haliaeetus leucocephalus (bald eagle): 104836575
Entry
104836575         CDS       T08630                                 
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Pathway
hle03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hle00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104836575 (XAB2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hle03019]
    104836575 (XAB2)
   03041 Spliceosome [BR:hle03041]
    104836575 (XAB2)
Messenger RNA biogenesis [BR:hle03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104836575 (XAB2)
Spliceosome [BR:hle03041]
 Complex B
  Other components
   Prp19-related factors
    104836575 (XAB2)
 Complex C
    104836575 (XAB2)
SSDB
Motif
Pfam: HAT_Syf1_M HAT_Syf1_CNRKL1_N TPR_14 HAT_Syf1_CNRKL1_C HAT_PRP39_N HAT_PRP39_C TPR_19 TPR_2 TPR_7 TPR_12 TPR_15 TPR_8 Suf TPR_1 PPR
Other DBs
NCBI-GeneID: 104836575
NCBI-ProteinID: XP_010573543
LinkDB
Position
Unknown
AA seq 439 aa
MAGTSGTGGDIGNTAGDIGDAGDTGGTLGTLRTLAITCVTVSPLVPITCVTVSPLVPITR
AREEEDVQHEEEILRNPFSVRCWLRYAQARQKGPRHRLNLLFERALRELPGRWGGHPQGD
LGDMLEWEDGDILGMPRIWLDYCQFLVDQGRITRTRRTFDRALRALPITQHHRIWPLYLQ
FVRRYPLPETAVRVYRRYLKLSPESAEEYVEYLRSVGRLDEAAVRLARLVNDERFVSKEG
KSNYQLWQELCELLSQHPERVRSLDAGAIIRGGLTRFTDQLGRLWGALADCYIRSGHFEK
ARDVYEEAVQTVMTVRDFTQVFDSYAQFEESVIAAKMETVAELGKEEDEEVELELRLARF
EQLMARRPLLLNSVLLRQNPHNVHEWHKRVQLYQGRPEQIINTYTEAVRTVDPFKATGRP
HGLWVAFARFYEDNGQLDD
NT seq 1317 nt   +upstreamnt  +downstreamnt
atggcggggacatcagggacagggggggatattgggaacactgcgggggacattggggat
gctggggacaccggggggacgctggggacattgagaacactcgccatcacctgtgtcaca
gtgtcacctctcgtccccatcacctgtgtcacagtgtcacctctcgtccccatcacccgt
gccagggaggaggaggacgtgcagcacgaggaggagatcctgcgcaaccccttctcggtg
cggtgctggctgcgctacgcccaggcccggcagaaggggccgcgccaccgcctcaacctc
ctcttcgagcgcgccctcagggagctgcccggcaggtgggggggacacccacagggggac
ctcggggacatgttggagtgggaggacggggacatcctgggtatgccccgcatctggctg
gattactgccagttcctggtggatcagggccggatcacacggacgcgccgtaccttcgac
cgggctttgcgggcgctgcccatcactcagcaccaccgcatctggcccctctacctccag
ttcgtccggcgctaccccctgcccgagaccgccgtccgcgtctaccgccgttacctgaag
ctgagccccgagagcgcggaggagtacgtggagtacctgcgctccgtgggtcgcctggac
gaggccgctgtgcgcctggctcgcctcgttaacgacgagcgcttcgtctccaaggagggc
aagtctaattaccagctgtggcaggagctgtgtgagctgctctcccagcacccggagcgg
gtgcgctcgctggacgcgggtgccatcatcagggggggactgacccgcttcaccgaccag
ctgggccggctctggggagccctggccgactgctacatccgcagcggccacttcgagaag
gcccgggatgtctacgaggaggcagtgcagacggtgatgacggtgcgggacttcacccag
gtctttgacagctacgcccagttcgaggagagcgtcattgccgccaagatggagacagtt
gcggagctgggcaaggaggaggacgaggaggtggagctggaactgcggctggcccgcttt
gagcagctgatggcccggcgcccgctgctgctcaacagcgtcctgctgcgccagaacccc
cacaacgtccacgagtggcacaagcgggtgcagctctaccagggacgtcccgagcagatc
atcaacacctacacagaggccgtccgcaccgtggaccccttcaaggcaacggggcgcccg
catgggctgtgggtggccttcgcccgcttctacgaggacaacgggcagctggatgat

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