Haliaeetus leucocephalus (bald eagle): 104836894
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Entry
104836894 CDS
T08630
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03013
Nucleocytoplasmic transport
hle03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104836894 (UPF3A)
03015 mRNA surveillance pathway
104836894 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104836894 (UPF3A)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104836894 (UPF3A)
mRNA cycle factors
P-body specific factors
104836894 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104836894
NCBI-ProteinID:
XP_010573971
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MRVGGRDKWPMDTPLRRESPRRDPDASSNPPPPSSPPPPLHPAPGKQRDEKKTALSKVVI
RRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSLYPHLYSRAYINFRNPEDILLFRDRFD
GYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDAKAGSIEDDPEYRKFLESYCADEEKIC
ANPEILLGEIEAKTRELIARRTTPLLEYIKNRKLEKQRIREEKREERRRRELEKKRLREE
EKRKRREEERRKRKEVEKQKKISEKEIRIKLLKKPEKGDELASEKHKEKGEEADIEENKW
DKSPGSGSIKSKSLEGSLKELKEKSQNDSDKEQRDLERRFREKEPERQRYRLDDGRKHRA
HYEFDKFVRRNEEELKWGKGYNPDRGKKGNYNYSFTVEAVDKLGKEDKCDDMASKKERIR
NKDRPAMQLYQPGARIRTHMGSTSKTYDCSGKSFEDVLDKKYEADNSAGGGSEKSEEAE
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcggcggccgcgacaagtggcccatggacaccccgctgaggcgggagtcgccc
cgccgcgacccggacgcttcttcgaaccctcctccgccatcttccccgccgccaccgctt
cacccggcgccgggtaaacagcgagatgagaaaaaaacggctctgagcaaggtggttatt
cgacggcttcctccttgtctcactaaggagcaactggaggaacagctacatcctctacct
gcccatgattattttgagttttgcactgctgatcccagcctttatcctcatctctactca
agagcatacattaactttagaaatcctgaggacatccttctttttagagatcgctttgat
ggctatgtcttcattgataataaaggtttggagtatcctgcagtggttgaatttgctcca
ttccagaagatttcaaaaaagaagctgaagaagaaagatgccaaggctgggagcattgaa
gatgatccagaatataggaaatttttagagagctattgtgctgatgaagagaaaatctgt
gccaatcctgagattcttttgggagagattgaggccaaaacaagggaactcattgctaga
agaacaacaccccttttggaatatattaaaaatagaaaattagaaaagcagaggatacga
gaagagaaaagagaagaaagaaggcggagagaattggagaagaaacgtctgcgggaagaa
gagaaaaggaagcgcagagaagaggaaagacgtaaaagaaaagaagtggagaagcagaag
aaaatttctgaaaaagaaataaggatcaagcttctgaagaagcctgaaaaaggagatgaa
ctggccagtgaaaagcacaaagaaaaaggtgaagaagctgacattgaggaaaacaaatgg
gataaatcacctggatctgggagtataaaatccaaatctttggagggttcactaaaagaa
cttaaggaaaagtcacaaaatgatagtgacaaagagcaaagagatttggagagaagattt
cgagaaaaagaacctgaaagacaaaggtatcgattggatgatggcagaaagcatagagct
cactatgagtttgacaagtttgtgagaaggaatgaagaagagctgaaatgggggaaagga
tacaacccagacagaggaaagaaagggaactacaactacagcttcactgtggaggcagta
gacaaactgggtaaagaggacaagtgtgatgacatggcatccaaaaaggagcgcataaga
aataaggatcgcccagccatgcagttataccagccaggagctcgcattcgaacacatatg
ggatctacaagtaaaacctatgactgcagtgggaaatcctttgaagatgtccttgataaa
aagtacgaggcagataattcagctggaggtggttctgaaaagagcgaagaagcagaataa
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