Haliaeetus leucocephalus (bald eagle): 104837144
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Entry
104837144 CDS
T08630
Symbol
PABPC4
Name
(RefSeq) polyadenylate-binding protein 4 isoform X1
KO
K13126
polyadenylate-binding protein
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03015
mRNA surveillance pathway
hle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104837144 (PABPC4)
09123 Folding, sorting and degradation
03018 RNA degradation
104837144 (PABPC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104837144 (PABPC4)
03041 Spliceosome [BR:
hle03041
]
104837144 (PABPC4)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104837144 (PABPC4)
mRNA cycle factors
Stress granule specific factors
104837144 (PABPC4)
Spliceosome [BR:
hle03041
]
Complex C
Other components
Complex C specific factors
104837144 (PABPC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_occluded
RRM_10
RBD_RDR6
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
104837144
NCBI-ProteinID:
XP_010574364
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MNTAASSYPMASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQ
QPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFS
AFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKERE
AELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEK
HEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKN
LDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGS
KPLYVALAQRKEERKAHLTNQYMQRIAGMRALPANTIINQFQPAAGGYFMPAVPQAQSRP
TYYAPNQMTQMRPNPRWQQGGRPQGFQGMPNAMRQSGPRPALRHLAPAGNAPASRGLPAA
AQRVGVGTAAQNLAPRPPVAAPAPRAVPPYKYASSVRSPHPAVQPLQAPQPAVHVQGQEP
LTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESPESLR
SKVEEAVAVLQAHQAKKEAAQKVGVVAATS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgaacacggctgccagcagttacccgatggcatcgctgtacgtgggtgacctgcacccc
gatgtcaccgaggccatgctctacgagaagttcagccctgctgggcctgttctctccatt
cgagtctgcagggatatgatcacccgtcggtccctcgggtatgcctatgtcaacttccag
cagccagcagatgctgagcgtgctctagataccatgaattttgatgtgatcaaaggaaaa
cccattcgcatcatgtggtctcagagggacccctccttgaggaagtcaggggttgggaat
gtcttcattaagaacctggacaaatccattgataacaaggcactttatgacacattctca
gcgtttgggaatattttgtcctgcaaggtggtgtgtgatgagaatggctctaagggctac
gcatttgtgcactttgagacccaggatgctgcagatagagccatcgagaagatgaacggc
atgctgctaaacgaccgcaaagtatttgttgggagattcaagtctcgtaaagagcgggag
gctgagttgggagccaaggcaaaggaatttaccaatgtttatattaaaaactttggggat
gacatggatgatgaaagactaaaggagctcttcagcaaatatggtaaaactctgagtgtt
aaagtgatgacagaccccactggaaaatccaaaggctttggctttgtaagctttgaaaag
catgaagatgctaacaaggcagtagaagaaatgaatggaaaggatatcaatgggaaaatg
gtatttgtaggccgagcacagaagaaggtcgagcgccaggcagagctgaaacggaagttt
gaacagctaaaacaggagagactcagccggtaccagggtgttaacctatacattaaaaac
ctagatgacactatagatgatgaaaaactgaggaaggagttttcaccttttgggtcaata
acgagtgccaaggtgatgctggaagatggacggagcaaagggtttggctttgtctgcttt
tcctctccagaggaagctacgaaagctgtgacagagatgaatgggcgaattgtgggctca
aagccattgtatgttgcacttgcacaaaggaaagaggagcgaaaggcccatctgactaat
cagtatatgcagcgcattgctgggatgagagccttgcctgccaacacaatcattaatcag
ttccagcctgctgctgggggatatttcatgcctgctgtgccccaggctcagagcagaccc
acttactatgcacccaatcagatgacgcagatgaggcccaacccacgctggcagcaaggg
ggaagacctcaaggcttccagggaatgccaaatgccatgcgccagtctggaccacggcca
gcactgcgccatctggcccctgccggcaatgctccggcctctcgtggcctccctgccgct
gcccagcgagttggcgttggcaccgcagcgcagaatttagctcctcgtccgcctgtagct
gcccctgctcccagagcggttcctccttataaatatgcctcaagtgtccgcagcccacac
ccagctgtacagcctttgcaggcacctcagcctgcagtacatgtgcagggacaagaaccg
ctaacggcctccatgctggctgctgcccctccccaggagcagaaacagatgctgggggaa
cgtttgtttcctctgattcaagctatgcaccccagccttgcagggaagatcacaggaatg
ctgctagagattgacaactcagagctgttgcacatgctcgagtctcccgagtccctccgg
tcaaaggtggaggaggctgttgcggtgttgcaggctcaccaagccaagaaggaagctgcc
cagaaggtgggcgtggttgctgctacctcttaa
DBGET
integrated database retrieval system
