Haliaeetus leucocephalus (bald eagle): 104837333
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Entry
104837333 CDS
T08630
Symbol
SNRNP40
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
KO
K12857
Prp8 binding protein
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104837333 (SNRNP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hle03041
]
104837333 (SNRNP40)
Spliceosome [BR:
hle03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104837333 (SNRNP40)
Complex C
U5 SnRNP specific factors
104837333 (SNRNP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Cytochrom_D1
WDR54
WD40_like
WD_LRWD1
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
104837333
NCBI-ProteinID:
XP_010574680
LinkDB
All DBs
Position
Unknown
AA seq
363 aa
AA seq
DB search
MAGGEGRRGVKRGGEEAREEMAGLGGAWPCPGGAPCSPPWHPLTRPFPRYLRQGPPRCSS
LQAPIMLLSGHEGEVYCCKFHPNGNTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVME
LHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDG
TVKLWDIRKKAAVQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGH
ADSVTGLSLSSEGSYLLSNAMDNTVRIWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWS
PDGSKVAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMG
EIQ
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggagaaggccggaggggggtgaagcgaggaggggaggaggcccgtgaggag
atggcggggctggggggggcctggccgtgccccggcggtgccccttgttcccctccatgg
catcccctcacccgccccttcccccgttacctccggcagggcccgccgcgctgctcctcc
ctgcaggcccccatcatgctgctctcggggcacgaaggagaggtgtactgctgcaagttc
caccccaatggcaacaccctcgcctccgctggcttcgacaggctcatcctgctgtggaac
gtctatggggactgtgataactacgccacactgaagggacacagtggggcagttatggag
ctgcactataacacagatggcagcatgctcttctcagcatccacagacaaaactgtggct
gtgtgggatagtgagactggagagagagtgaagagactgaagggccatacctcgttcgtt
aactcctgttacccagcaaggcgaggaccccagcttgtctgtacaggcagcgatgatggg
acagtgaagctgtgggatatcaggaaaaaagctgctgttcagacatttcagaacacgtac
caggtcttggctgtaactttcaatgacaccagtgatcagatcatatccggaggcatcgac
aacgatattaaggtgtgggaccttcgccagaacaagctcacttacacgatgagaggacac
gcagactcggtgacaggcctcagcctgagttcagaaggctcctacctgctctccaatgca
atggacaacacagttcgcatctgggatgtgcgaccatttgcccctaaagagagatgtgta
aagattttccaggggaacgtacataattttgaaaagaatcttctgaggtgctcttggtcc
ccggatgggagtaaagtcgcagggggatcagccgacaggtttgtctatgtgtgggacacc
acatccaggaggattttgtacaagctgccaggccatgccgggtcggtgaacgaactagct
ttccatccggaggaacccattatactctccgcatccagcgacaaaagactgtatatgggg
gagatccagtga
DBGET
integrated database retrieval system
