Haliaeetus leucocephalus (bald eagle): 104838622
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Entry
104838622 CDS
T08630
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104838622 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104838622 (PARN)
Enzymes [BR:
hle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104838622 (PARN)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104838622 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
104838622
NCBI-ProteinID:
XP_010576775
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MDFLLFQFGLCTFKYDHTEEKYVMKSFNFYIFPKPFNRSSPDVKFVCQSSSIDFLANQGF
DFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGSLSYVSPNAAKCPVTIPEDQKKFI
EKVVEQIEDLLKNEENESLELEPCTGFQRKLIYQTLSWKYPKGIHVETLESDKKERYIVI
SKVNEEERKRREQQKQAKEQEELNDAVGFSRVVHAIANSGKLVIGHNMLLDVMHTIHQFY
CPLPDDLSEFKEVTSCVFPRLLDTKLMASTQPFKEIINNTSLAELEKRLKEVPFSPPKVE
SAEGFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLSPPKNHVSARSKLIEPFFNK
LFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIAVNTSRYAESYRIQTYAEYVEKKHEEKQAKRKCTEDSWKEMERKRLKT
QCTPYVSQSRYYCVNSFTGTSTVGKRSMSPIQEETGSDDMEEGEGQDPEYDQTDSCAESL
PDGKKRAKKFKKIKTEQVPAGSLTASSTGIFEVPETW
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggattttttgctctttcagtttggcctttgcacttttaaatatgatcacacagaagaa
aagtatgtaatgaagtcatttaatttctatatttttccaaaaccctttaacagaagttca
ccagatgtcaagtttgtctgtcagagttcaagtatagattttttagcaaaccaaggattt
gattttaataaagtttttcgcaacggaattccatatttaaatcaggaagaagaaagacag
ctaagggaacagtatgatgaaaaacgttctcaggccaatggtgcaggatctctgtcatac
gtttctcctaatgccgcaaagtgtcctgtaacaattcccgaagatcagaaaaaattcatt
gagaaagtagtggaacagatagaagacttattaaagaatgaagaaaatgaaagtttggaa
ctggagccatgcacaggatttcagaggaaattaatttatcagaccttgagctggaagtat
ccaaaaggtatccatgttgaaactctggagtcagataagaaggagagatatattgttatt
agtaaggtaaacgaagaagaacgaaaaagaagagaacagcagaaacaagcaaaagaacag
gaagaattgaatgatgcggtaggattttccagagtagttcatgccattgctaattctggc
aagcttgttattgggcacaatatgctattggatgttatgcataccatacaccagttctat
tgtcccctacctgatgacctaagtgagttcaaggaagtaacatcatgtgtctttccccgg
ctattggatactaaactgatggcaagtacacaaccttttaaggagatcattaataataca
tcccttgcagaactggaaaagcgtttgaaagaggttccattcagccctcctaaagttgaa
agtgcagaagggtttccaagttatgatacagcttctgaacaacttcacgaagcaggatat
gatgcttacattactggactgtgcttcatctccatggctaatttcctaggttccttcctc
agtcctccgaaaaaccatgtgtctgctagatcaaaactcattgaacctttttttaacaag
ctatttcttatgagagtaatggacataccatatctcaatttggaaggaccagacttgcag
ccaaaacgagatcatgttcttcatgttacttttcccaaagagtggaaaactagtgacctt
taccagcttttcagtgcctttggtaacattcaggtttcatggattgatgacacatcagca
tttgtatcattgagccagccagaacaagtacaaatagctgtaaacaccagcaggtatgct
gaaagttataggatccagacatatgcagagtatgttgagaaaaaacatgaagaaaaacag
gcaaagagaaaatgtacagaagatagttggaaggagatggagagaaagcggttaaaaact
caatgcacaccttacgtttcccagagtcgatactactgtgttaacagttttacaggtacc
agtacagtaggaaagagaagcatgagtcccattcaggaggaaaccggttctgatgatatg
gaagagggagaaggccaagatccagaatatgatcagacagactcctgtgcagagtccctt
ccagatggtaagaagagagcaaaaaagttcaaaaagatcaagacagaacaagttccagca
ggaagcctcacagctagttccactggaatttttgaagtccctgaaacatggtag
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integrated database retrieval system
