Haliaeetus leucocephalus (bald eagle): 104838883
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Entry
104838883 CDS
T08630
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104838883 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104838883 (CNOT6)
Enzymes [BR:
hle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104838883 (CNOT6)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104838883 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104838883 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
104838883
NCBI-ProteinID:
XP_010577201
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYDPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANA
HMHWDPDYSDVKLVQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYT
NYTFDFKGIIDYIFYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPPVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaggaaaagtacgatccacctgatccacggaggatgtacacaattatgtcctca
gaggaagcagccaacggaaagaaatcacactgggcagagttggaaataagtgggaaagtg
agaagcttaagttcgtcattgtggactctgacccatttgacagctttgcatctcagtgac
aattccttatcccgtattccttcagacattgccaagcttcacaatctggtatatctggac
ctgtcctctaataaaattcgcagtttaccagcagagctcggaaacatggtgtcactcagg
gaactacatttaaataacaacctgttacgagttttaccttttgagctgggaaaactgttc
cagttacagactttgggtctgaaaggaaatccacttacacaggatattctgaacctttat
caggaaccagacgggacgcgaaggctactgaactacttgcttgataatttggcaggtact
gcaaaaagaatttcaacggaacaaccacctccaagatcttggattatgttgcaagaacca
gaccgtacaagaccaacagccttgttctctgtcatgtgttacaacgtactttgtgataaa
tatgctacccggcagctgtatggctattgtccatcttgggcattgaactgggaatacaga
aaaaaagccattatgcaggaaatcctgagctgcaatgctgacatcataagtcttcaggag
gttgaaacggaacagtactacagttttttcctggtagaattgaaagaacgtggctacaat
ggattcttcagtccaaagtctagagctaggacaatgtcagaacaggaaagaaaacatgtt
gatggttgtgcaatatttttcaaaacagaaaaatttactttggttcaaaaacatactgtt
gagttcaatcaactagctatggcaaactcagaaggttcagaagctatgctgaacagggtg
atgacaaaagataacattggagttgctgtattgttagaactgcgaaaggaattgatagaa
atgtcatctggaaagccacatcttgggatggaaaaacagctagttcttgtagctaatgca
catatgcattgggacccagattattctgatgtgaagctggttcagactatgatgttcctg
tccgaggtaaagaacattattgataaagcttctcgtagtctcaaacctggtgtttcggga
gaacttggaaccattccacttgtactgtgtgcagatctcaattctctaccagactctggt
gttgttgagtacttgagcactggtggagtggaaacaaaccacaaggattttaaggaactg
agatacaatgaaagtcttactaacttcagctgtaatggaaaaaatggaacaacaaatgga
agaattacacatggtttcaagttgaagagtgcctatgagaatggtctaatgccttataca
aattacacatttgacttcaagggtattattgactacatcttctactctaaacctcagcta
aacatacttggcattcttggacctttggatcatcattggttaatagagaacaatataagt
ggttgtccacatccactcatcccttctgaccacttctcactttttgcacaactggagctt
ttgctgcctttcctgcctcctgtaaatggaatccatctccctggcaggaggtag
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