Haliaeetus leucocephalus (bald eagle): 104839312
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Entry
104839312 CDS
T08630
Symbol
DHX38
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104839312 (DHX38)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hle03041
]
104839312 (DHX38)
Enzymes [BR:
hle01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
104839312 (DHX38)
Spliceosome [BR:
hle03041
]
Complex C
Other components
Step II factors
104839312 (DHX38)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
PhoH
SRP54
Microtub_bd
AAA_16
AAA_30
AAA_7
Motif
Other DBs
NCBI-GeneID:
104839312
NCBI-ProteinID:
XP_010577824
LinkDB
All DBs
Position
Unknown
AA seq
1237 aa
AA seq
DB search
MAAASEESLHRLAGTSPEAEAGGLVLRRRSAAAEQHVFKAPAPRASLLGLDVLAAQKRRE
REEEAAGGKRSRVSSYKDWEEGRDEAGSPEEDEEEEAGAESGRRSRSARKDRHYRSVHVE
TPSYTGGVSEEFWERSRQRERERREHGVFASSKEEKERKKEHSRDRDHDRKRDREERDRS
RHSSRSERDGSSERSSRRSEPESPRHRPKDAATPSRSSWEEDDSGYSSARRSQWESPSPT
PSYRDSERSHRASSLRDTDRRDRDRSVRSKYSDKTPLPTPSYKYNEWADDRRHLGSTPRL
SRGRGRRADGEEGIAFETEEERQQWEDDQRQADRDWYMMDEGYDEFHNPLAYSSEEYVKK
REQHLHKQRQKRISAQRRQINEDNERWETNRMLTSGVVHRIEVDEDFEEDNSAKVHLLVH
NLVPPFLDGRIVFTKQPEPVIPVKDATSDLAIIARKGSQLVRKHREQKERKRAQHKHWEL
AGTKLGDIMGIKKEEEKDEMVTEDGKVDYRTEQKFAEHMKEKSEASSEFAKKKSILEQRQ
YLPIFAVQQELLSILRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAA
MSVAKRVSEEMGVRLGEEVGYAIRFEDCTSENTVIKYMTDGILLRESLREADLDNYSAII
MDEAHERSLNTDVLFGLLREVVARRSDLKLVVTSATMDADKFASFFGNVPIFHIPGRTFP
VDILFSKTPQEDYVEAAVKQALQVHLSGAPGDILVFMPGQEDIEVTSEQIVEHLEELEKA
PALAVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKV
FNPRIGMDALQIYPISQANANQRAGRAGRTGPGHCFRLYTQSAYKNELLTTTVPEIQRTN
LANVVLLLKSLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFP
LDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQVREKFAVPESDHLT
YLNVYLQWKNNSYSTLWCNQHFIHAKAMRKVREVRAQLKDIMVQQRMSLASCGTDWDVVR
KCICAAYFHQAAKLKGIGEYVNIRTGMPCHLHPTSSLFGMGYTPDYIVYHELVMTTKEYM
QCVTAVDGEWLAELGPMFYSIKHAGKSRQENRRRAKEEVSAMEEEMALAEEQLRARREEQ
ERRNPLGSARSTKIYTPGRKEQGEPLTPRRTPARFGL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcgagcgaggagtcgctgcaccggctggcggggacgagcccggaggccgag
gccggcgggctggtcctgcggaggcggagcgccgccgccgagcagcacgtcttcaaggcg
ccggcgccgcgggcctccttgctgggcctggacgtgttggcggcccagaagcggcgggag
cgcgaggaggaggcggccggcgggaagcggtcccgggtctcctcctacaaggactgggaa
gagggccgtgacgaggcgggcagccccgaggaggacgaggaggaggaggcgggggcggag
agcggccggcgcagccggagcgcccgcaaggacaggcattaccgttctgtccatgtggaa
acaccttcctacacagggggtgtcagcgaggagttttgggaacgcagccggcagcgggaa
agggagcgtcgggaacatggtgtctttgcttcctccaaggaggagaaggaacgaaagaag
gaacacagtcgggatcgggaccacgatcgtaaacgggaccgcgaggagcgggacagaagt
cgtcacagcagcagatcagagagagatggctcatcggagcggagcagcaggagaagcgaa
ccagagagccccagacatcggcccaaagatgcagccacaccgtctcgctccagctgggag
gaagatgatagtggctacagtagtgcccgccgctcgcagtgggaatctccctcacccacg
ccttcctatcgagactcggagcgcagccaccgggcatcgtcactgcgggacacggaccgg
agagaccgggacaggtctgtaaggagcaagtactcggataagacaccattgcccaccccg
tcatacaaatataacgagtgggctgacgaccggagacatctggggtccacgccgcggctg
tccagagggagagggcggcgtgcagacggggaggagggcattgcctttgagacggaggag
gagcggcagcagtgggaggacgaccagcggcaagctgaccgggactggtacatgatggat
gagggctacgacgagtttcacaaccccttggcctactcctctgaggagtatgtgaagaag
cgggagcagcacttgcacaagcagaggcagaagcgcatctcagcacagcggcggcagatc
aatgaggataatgagcgctgggagacgaatcgcatgctgaccagtggtgtggttcatcgg
attgaagtggacgaagattttgaggaggataactctgctaaagtgcatctgttggtgcac
aacctggtgccccctttcctagatggaaggattgtcttcaccaagcagccagagccagtc
atccctgtcaaggatgccacctcagatttggccatcatagcccggaaaggcagccagttg
gtgcgcaagcacagggagcaaaaggagcgtaagagggctcagcataagcactgggagctg
gcaggcacaaaactgggagacattatggggatcaagaaggaggaggagaaggacgagatg
gtgacagaagatggcaaagtggattacaggactgagcagaagtttgctgaacacatgaaa
gaaaaaagtgaagccagcagtgagtttgccaagaagaaatcaatcctggagcagagacag
tatctgcccatctttgccgtgcaacaggagctgctctccatcctcagagacaacagcatt
gtgattgtggtgggggagacggggagtgggaagacgactcagctgacgcagtacctccat
gaggatggctacacagactatggcatgattggctgcacccagccccgcagagtggcggcc
atgtcagttgccaagcgggtcagtgaagagatgggagtgcgtctgggagaggaggtgggc
tatgccatccgctttgaggactgcacgtccgagaacacagtgatcaaatacatgacagat
gggatccttcttcgtgagtcactgcgagaggctgacctggacaactacagtgctatcatc
atggatgaggcacatgagcgctcactcaatactgacgtgctctttggcttgcttcgggag
gtggtggcccgacgctcagatctgaagcttgttgtcacctcggccaccatggatgcagat
aagtttgcctccttctttgggaatgttcctattttccacattcctgggcgcactttccct
gttgatattcttttcagcaagaccccacaagaggattatgtggaggcagcagtgaaacaa
gccctgcaggtccatttgtctggtgctcctggagacatccttgtcttcatgcctggccag
gaggacatagaggtgacctcagagcaaattgtggaacaccttgaggagctggagaaggcg
cctgctcttgctgtactgcctatctattctcagctaccatcagacttgcaggccaagatc
ttccagaaggctccggatggggtcaggaaatgcattgttgccactaacattgcagagacc
tcgctgacagtggacggcatcatgtttgtgattgactcgggctactgcaagttgaaggtt
ttcaatccccgtataggcatggatgcgctgcagatctatcccatcagtcaagccaatgcc
aatcagagggcaggccgagctggccgaacaggcccaggccactgcttcaggctctacacc
cagagtgcctacaagaatgagctgctgacaaccacggtgcccgagatccagcgcaccaac
cttgccaatgtagtgcttttgctcaagtccctgggtgtgcaggacctgctgcagttccac
ttcatggatccaccccccgaggacaacatgctgaactccatgtaccagctgtggattctg
ggggccctggataacacaggtggtctgacctcaacagggcgtctcatggtggagttccca
ctggatcctgcactctccaaaatgctcattgtctcctgtgacatgggttgcagctctgag
atcttgctcattgtctccatgttgtctgtgcctgccatcttttatcggcctaagggccga
gaggaggagagtgaccaagtgcgggagaaatttgctgttccagagagtgatcacttgact
tatctgaatgtttacctgcagtggaagaacaacagctattctacactgtggtgcaaccag
cacttcatccatgccaaggccatgcggaaggtgcgggaggtgcgtgcccagctcaaggac
attatggtgcagcagcggatgagcctagcttcctgtggtactgactgggatgttgtcagg
aagtgcatctgtgctgcgtatttccatcaagctgcaaagctgaagggcattggggagtac
gtgaacatccgcacaggcatgccctgccacctgcaccccacaagctctctgtttggcatg
ggctacacaccagactacattgtgtatcatgagttggtcatgaccaccaaggaatatatg
cagtgtgtcactgctgtggatggagagtggctggcagagctgggccccatgttctacagt
atcaaacatgctggcaagtcacgccaggagaaccgccgccgtgccaaggaggaagtgtct
gccatggaggaagagatggctttggctgaggagcagctgcgtgcccgccgggaggagcag
gagcgccgtaacccactgggcagtgcaagatctactaaaatctacacccctgggcggaag
gagcagggggagcccttgacgccacgacgcaccccagcccgctttggcctctaa
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integrated database retrieval system
