KEGG   Haliaeetus leucocephalus (bald eagle): 104839735
Entry
104839735         CDS       T08630                                 
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein
  KO
K20183  Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
hle  Haliaeetus leucocephalus (bald eagle)
Pathway
hle04140  Autophagy - animal
hle04148  Efferocytosis
hle05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:hle00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    104839735 (VPS39)
   04148 Efferocytosis
    104839735 (VPS39)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104839735 (VPS39)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hle04131]
    104839735 (VPS39)
Membrane trafficking [BR:hle04131]
 Endosome - Lysosome transport
  Tethering complex
   Hops complex
    104839735 (VPS39)
SSDB
Motif
Pfam: Vps39_1 CNH zf-Vps39_C TPR_Vps41 Clathrin Beta-prop_RIG_2nd SAM_CEP-1_C Lgl_C
Other DBs
NCBI-GeneID: 104839735
NCBI-ProteinID: XP_010578495
LinkDB
Position
Unknown
AA seq 855 aa
MIRLEEWLLVGTKQGHLLLYRIKKDIGCNRFEVTLEKSNKNFSKKIQQIHVVSQFKILVS
LLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQQSDTGEEVLRMCVAVRKKLQLYFWKD
REFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVDGKGSIKELFPTGKQLEPLVA
PVADGKVAVGQDDLTVVLNEEGVCTQKCALNWTDIPIAMEHQPPYIIAVLPRYVEIRTFE
PRLLVQSIELQRPRFITSGGTNIIYVASNHFVWRLIPVSIATQIQQLLQDKQFELALQLA
EMKDDSDSEKRQQIHHIKNLFAFNLFCQKRFDESMQVFAKLGTDPTHVMGLYPDLLPTDY
RKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKLNDSDHQSSTSPLMEGTPTIK
SKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEESEHVLKKAHKYSELIILYEK
KGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENLHLVFSYSVWVLRDFPEDGLK
IFTEDLPEVEALPRDKVLSFLIENFKSLTIPYLEHIIHVWEETGADFHNCLIQLYCEKVQ
ALMKEYLSSYPADKTPVPAGEEGGDLGDYRKKLLLFLEKSSWYEPSRLISDFPFDGLLEE
RALLLGRMGKHEQALFIYVHILKDTNMAEDYCHKHYDRNKDGNKDVYLSLLRMYLSPPSV
HCLGPIKMEVLEPQANLQAALQVLELHHSKLDTTKAINLLPANTQISEIRIFLEKVLEEN
AQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKVCTVCKKKIGNSAFARYPNAI
VVHYFCSKEVNTLDT
NT seq 2568 nt   +upstreamnt  +downstreamnt
atgataaggcttgaggaatggctccttgttggtaccaaacaagggcatcttttgctttac
aggatcaagaaagacataggttgcaataggtttgaagtgacactagagaaatccaacaag
aacttctcaaaaaagattcagcagattcatgttgtttctcagtttaaaattctggtcagt
ctattagaaaataacatttatgtgcatgacctattgacgtttcaacaaatcaccacagtt
tccaaggcaaaaggtgcatctctcttcacttgtgatcttcagcagtcagatacaggggaa
gaggtgctgagaatgtgcgtggcagtgcggaagaagctacaactttatttttggaaggac
agagagttccatgaactacagggggacttcagtgtacctgatgtaccaaagtctatggcc
tggtgtgaaaactccatctgtgtaggcttcaagagggactattacctgatacgggtggat
ggaaaaggatccatcaaagaactatttcccacagggaagcagctggaaccattggtagct
cctgtagcagatggaaaagttgcggttggccaagatgatctaacagttgtgctaaacgaa
gaaggggtctgtactcagaaatgtgccttgaattggacagatattcctatagccatggaa
caccagcctccctacatcattgctgttctgccgaggtatgtggagattcgcacttttgag
ccccggctgctggtacagagtattgagctgcagagaccacgcttcatcacctctggaggc
acaaatattatatatgtggcaagtaatcactttgtttggcggctcattccagtgtcaata
gccacacagatccagcagcttctgcaggacaagcagtttgagttggctttgcagctggca
gaaatgaaagatgattcagatagtgagaagcgacaacaaattcaccacataaagaacctc
tttgccttcaacctcttctgccagaagcgctttgatgaatccatgcaagtttttgccaag
cttggtacagatcccactcacgtgatgggtctgtatcctgacctgctgcccacagattac
aggaaacagctacagtatcccaaccccctgccagggctctctggggcagagctggagaag
gcacatttagctctgatagactacctaactcaaaaaagaagtcagctggtgaagaagcta
aatgattctgatcatcagtccagtacgtcacccctcatggaaggaacacccacgatcaaa
tccaaaaagaagctgctacaaatcattgataccacccttttaaagtgttacctccataca
aatgtagcactggtggcaccattgctacgtctggagaacaatcactgccatattgaggag
agtgagcatgtactaaagaaggcacacaaatatagtgagctgataatactgtatgagaag
aaaggtctgcatgagaaagcattacaggtactggtggatcagtcaaagaaagccaactca
cctttgaagggtcatgagaggacagtgcaatatctgcagcatttgggtacagagaacttg
cacttggtattttcctactctgtctgggtgctaagagattttcctgaagatggactgaag
atatttacagaagacctccctgaagtggaagctttgccacgagacaaagtgctcagtttc
ttgatagaaaattttaaaagcttgactattccttatctggaacacatcattcatgtctgg
gaagaaactggtgcagactttcacaactgtctgatccagctgtactgtgagaaagtgcag
gccttaatgaaagaatatctcagttcttaccctgcagataaaactccagtgcctgctggg
gaggaaggaggagacttgggggattaccggaaaaagcttctactttttctggagaagtct
agctggtatgaacctagtcggctaattagtgacttcccctttgatggtctcctagaagaa
cgtgctctgctcttgggtcgtatggggaagcacgagcaagctctgtttatttatgttcat
attttgaaggacaccaacatggctgaagactactgccataaacattatgacagaaacaaa
gatggcaacaaagatgtctatctgtcactgcttcggatgtatctctccccacctagtgtt
cattgcctgggaccaatcaagatggaagtgctggagcctcaagccaatctgcaggctgct
ctgcaggttttggaactacatcacagcaaactggataccaccaaggcgataaacctgctc
ccagcaaatacccagattagtgagattcgaatcttcttagagaaagtccttgaagaaaat
gctcagaagaaaagatttaatcaagtgctcaagaatcttctccatgcagagtttctgagg
gtccaggaggagcggatcttgcatcagcaagtgaagtgcattattacagaggagaaggtg
tgcactgtatgtaaaaaaaagataggtaacagtgcatttgctcgataccctaatgcaata
gtcgtgcattatttctgctccaaagaagtcaacacattggacacctga

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