Haliaeetus leucocephalus (bald eagle): 104842284
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Entry
104842284 CDS
T08630
Symbol
PNLDC1
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like domain-containing protein 1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Pathway
hle03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104842284 (PNLDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hle03019
]
104842284 (PNLDC1)
Enzymes [BR:
hle01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104842284 (PNLDC1)
Messenger RNA biogenesis [BR:
hle03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104842284 (PNLDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
104842284
NCBI-ProteinID:
XP_010582828
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MEFTGLHSTFPQNNQPSLFDSPAERYLKARQSVQRFTVTQLGLAIFSNENSNKYMVHSYN
FFLFPSMLGVTDVEFTLSASSIQFLSHYGFDYNKFLKDGIPYMNEVQEKILSQHLLEGSW
KVSSALDRDVLKKAIDEVTCWIGAAEEEETMILQDLSGSQMFEVQLVLRQALPNVWTQPL
GDKVMVKKVSPQHRELLENSPDDCCQKELILLSARGFTNLFQTLVKAKKPLVGHNMLMDL
MHLHDKFYKPLPESYEEFKRNIHNLFPVLIDTKTVTKSIWKKCQFPPVSNLLEVYAALCS
KDPKDPTCPVIALASDCSKYAEKKSPHEAGYDAFLCGSVLLKSAHLLLCRFTDDAVEAGP
SFSQYLTVLAEYLNKVNFIRGGVSSINFSGEDAPCQHPPLLVVHVQGWPGLNERQIYQEF
KALCRFDVRWLSKNQFILLSNKFKHVRLVLRDYKHHPHLRISVYRHWRHSPRVNCLLQVS
SIVALWSLLAFVLGGAPCCSF
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggagtttactggcttacattcaactttcccacaaaataaccagcccagcctgtttgat
tcccctgcggagcggtacctgaaggccaggcagagcgttcagcgcttcactgttactcag
cttgggctggcaatattctcaaatgaaaattcaaacaagtatatggtgcattcgtacaac
ttttttctctttccctcaatgctgggagttacagatgtcgaattcaccctttctgcatct
agcattcagttcctgtctcattatggctttgactataataagttcctcaaagatggaatt
ccatacatgaatgaggtacaggagaagatccttagccagcatctcttggagggtagctgg
aaagtcagcagtgccctggacagggatgtgctgaagaaggctattgatgaagtgacgtgt
tggataggtgcagcagaggaagaggagactatgattctgcaggatctgagtggctctcag
atgtttgaagttcagctggttctgagacaggctctcccaaatgtttggacacagcctctt
ggagacaaggtaatggtgaaaaaagtgagtccacagcatcgggagcttctggagaactcc
cctgatgactgctgtcagaaggagctcattctcctgtctgcccggggcttcaccaacctc
ttccagacacttgttaaagccaagaagcccctggtgggacacaacatgcttatggacctt
atgcatcttcacgacaagttctacaagccccttccagaaagctatgaggaatttaaaagg
aacattcacaacctgtttcctgtcctcatagacaccaagactgtaacaaaatccatctgg
aagaaatgtcagtttcctccagtatctaatcttttggaggtatatgcagctttgtgcagc
aaagatcccaaagatccaacgtgccccgtgatagctcttgcaagtgactgctcaaaatat
gctgagaagaaatctcctcacgaggcaggctatgacgcatttctctgtggttcagttctt
ctgaagtcagctcatttgctactgtgcagatttacagatgatgcagtggaggctggtcct
tctttctctcagtatctcaccgtgttagccgagtatctgaacaaagtgaatttcatccga
ggtggtgtttcaagcattaatttttctggggaagatgctccctgccaacatccccctctc
ttggttgtccatgtccaaggctggccagggctgaatgaaaggcagatttaccaagagttt
aaagctctttgtcgctttgatgtcagatggctttcaaagaaccagttcattctgctgtcc
aataaatttaagcatgtcaggcttgttctgcgagattataagcatcaccctcatctgcgg
atttctgtctatcgccactggagacactctccacgtgtgaactgcctgctgcaagtctct
agtattgtggcactgtggtctctcttggcctttgtactcggaggagctccttgctgttca
ttctaa
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