Haliaeetus leucocephalus (bald eagle): 104842549
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Entry
104842549 CDS
T08630
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hle03036
]
104842549 (CHD9)
Chromosome and associated proteins [BR:
hle03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104842549 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
HTH_Hrp3
Motif
Other DBs
NCBI-GeneID:
104842549
NCBI-ProteinID:
XP_010583281
LinkDB
All DBs
Position
Unknown
AA seq
2892 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRSQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPPVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVNNSQQFSSPYSYSNNHISPTSLLQSTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSNSFQMLHSAHPQGNFSTSKLSPVNINFPTS
TGSASQISHFTDPIESNGFTSLDDNLLHQVETHNEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTQSSDLVRAQSQSQIHPWHSSVSNQHLPDRSRVTLQGQP
PSSKKTDGSGSYTKLQNTQVRAMSEKKQKKKADSESKQEKANRIISEAIAKAKERGERNI
PRVMSPENFPSVSAEGKEEKKGRKVKSKPKDKESKKPKTGSSSKIKEKAKIGKLIITLGK
KQKRKNESSDELSDAKQTPQRPLKDEDSQKRRSNRQVKRKKYAEEGEGKQSEEEAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LAGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGAYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSSPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDDKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGNEFQKVFDGIDASEIDVWVPEPDHSEVPAEWWDAEADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYIDGDVEDPEYKPAPAM
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
IQPSFPIQTNMMQPPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMSAQRNYNQNKVALSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFE
DAKAKNENLKEDPQSSEEESMSTEETQTIMKSEPLSPKNGTPIQNTDHKPSMKTETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTAHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSSYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSNTVASFYTTKLLDSPGAAADYSEPSAPTPPLAGVKEEYDQSPQMSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFP
KSLPKSGTSSHLTASANGVIVDSQPVVKKRRGRRKNVEGVDVLFINRNKQPNHVNPGINS
CQVAAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFDRILTGPVVREEVSRRGRRPKSEIAKA
TAAAAAATAASVSVNPLLANGLLPGVDLPSLQALQQNLQNLQSLQVTAGLMGMPAGLTTG
GEAKNMAAMFPMLLSGMAGLPNLLGMGGLLTKSTESISEEKKGSDSKEADKKKERTEDQN
TDTGGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFD
VQNSESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTS
SSSEDSDSSDED
NT seq
8679 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcattgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgagtttgatcagctgaatcagtatgattcactgaaacttcac
tcagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcaattc
aattgttcaccagttcatccgcaaaaccagtctaatgggatgtttccagatgtggctgat
ggtagtcctatgtggggtcatcaaactgccacaactgtttcaaatcaaaatgggtccccc
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccgcagcatcagtgtgcctcgctacggtcgcaacaa
agcagaaacaacacagggcaagatgctctgagtcagccaaaagacttcatggaagttaat
gtatctacttctctcagagtcagtgttaaccacccacctccagtttctaatccatcaact
tcacagcagcctctgtctgttcaacagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtccccaactattactccatgttctgtc
aataatagccaacaattttcatctccttattcttactccaataaccacatttctcctacc
agccttcttcagtctacaacagctctttctacaagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaaatagttttcaaatgttgcattctgcacat
cctcagggcaactttagtacttcaaaactctctcctgtgaatattaattttccaacttct
actggttctgcttctcagataagccatttcactgaccctattgaaagcaacggttttaca
tctttagatgataacttacttcatcaagttgagactcataatgaaccatttacaggactt
gacccggatgacctccttcaggaagaccttctgccacagtttgatgattctgcatttgtt
caggatagcacaagccatgttttagagcatgacctagaacaccatataaccccacagcaa
gtaacacagtcatctgatcttgttcgggcacagtctcaaagtcagatccatccttggcat
tcttcagtttctaatcagcatctgccagacagaagtcgtgtgactttacaaggacagcct
ccttcctcgaagaagactgatggttcaggatcatatactaagttgcagaatacccaggtg
agggcaatgtctgagaagaagcagaagaaaaaagcagactcggaaagtaaacaagagaag
gcaaatcgcataatatctgaagcgattgcaaaagcaaaagagagaggagagagaaacatt
ccacgagtaatgagtcctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaag
aaaggtagaaaagttaaatccaaaccaaaggacaaggagagcaaaaaaccgaaaactggt
tcctcatccaaaattaaagagaaagcaaaaattggaaagctaatcatcacactgggtaag
aagcagaaaagaaaaaatgaatcttcagatgaattgtctgatgctaagcagactccacag
cggccactgaaagatgaagattcacagaagagaagatcaaatcgtcaagttaaaaggaaa
aaatatgctgaagaaggagaaggaaaacaatcagaagaagaagctaaagtttctgtaaaa
atcaaaaagaattctgcccctttacctgctgaacagcctttacaattatttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaa
gaaatatctgctgggatgacagtagaaacagaagagttttttgtaaaatacaagaactac
tcttatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatacag
cagaaaataaaacgattcaaactaaggcaagcacaaagagctcacttttttgcagatatg
gaagaagaaccttttaatcctgactatgttgaagtagaccgggtattagaagtatctctt
tgtgaagataaggacactggtgagcctgttatttactatttagtaaagtggtgttcgttg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttctaggcctgactcaaggagattggaccgaccgcctccaaac
tcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcatttta
gcagatgaaatgggtcttggcaaaaccattcagtctattacattcctctatgaaatcctc
ctggctggtataagagggccttttctgatcattgctccgctttccactataacaaactgg
gaaagagaatttcgcacgtggactgaccttaatgttgtggtatatcatggaagcatgatc
agcaggcagatgattcagcagtatgaaatgtacttcagggactcccagggacgtattgtt
cgaggtgcctacagattccaagccattatcacaacttttgaaatgatacttggtgggtgt
ccagagttaaatgcaattgaatggcggtgcgttattattgatgaagctcacagactgaag
aacaaaaactgcaaactcttggaaggactaaaattaatgaacctcgagcataaagtgctg
ttaacgggtaccccactgcagaacacagtggaagaattatttagtctccttcattttctt
gaaccattgcgttttcctgctgaatctacgttcatgcaagaatttggagaccttaaaact
gaggaacaggttcagaaactgcaagctatcctgaaacccatgatgctcagacgattaaag
gaagatgtagaaaaaaagctggctcctaaggaggaaactataattgaagtagaactaact
aatattcagaagaaatactatcgagcaattttggagaaaaattttgctttcttatccaaa
ggagcagggcaagcaaatgtacccaatctggttaacactatgatggaactcagaaagtgt
tgtaatcacccttatctcatcaaaggtgctgaagagaaaatccttggagagtttaaagaa
acgtatagcccaagttctcctgacttccatctgcaagcaatgattcagtcagctggtaaa
ttggttcttattgataaacttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaagatac
ttatatgaacgaattgatgggcgagtacgagggaatctcagacaagctgcaattgaccgg
ttcagcaaaccagattccgatcgctttgtcttccttctgtgcaccagagctggtggtttg
ggcattaatttgactgcagcagatacatgtataatttttgattctgactggaatcctcaa
aatgatctgcaggctcaagcccgttgtcacaggattggtcagaacaaagcagtgaaggtc
tacagactgataacacgtaactcctatgaaagagaaatgtttgacagagcaagtctgaaa
ctgggactggataaggctgtcttacagagtatgagtggaagagaaaacagtgttggtggc
atccaacaactctccaaaaaagaaatagaagacttgcttcgaagaggtgcatatggtgcc
attatggatgaagaagatgaaggttctaaattctgtgaggaagacattgaccaaattttg
cagcgtcgtactaaaactatcacaattgaatcagaaggaaggggctccacatttgccaag
gctagttttgttgcatctggaaacaggactgatatttcactggatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatagatgctatcagtggtagaaacagcctg
gttattgataccccaagaattaggaaacaaacacggccctttagcgctacaaaagatgag
ctggccgagttgtctgaagtggaaagtgagggtgatgataaaccaaagctccgcaggcct
tgtgaccgttccaatggatacggaagaacagagtgctttcgggtggaaaaaaacttgctg
gtctatgggtggggtcgatggagagaaattttgtcacatggtcgcttcaagagacaacta
aatgaacaggatgtggagataatttgccgagctttattagcttattgccttgttcactac
agaggggatgagaaaataaaaagttttatatgggatctcattaccccaacagaggatggg
caaacacgagagttacagaatcaccttggcttatcagcccctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcacttttgatatacacaaagcagaatggcttcga
aaatacaatccagaacatctattgcaagatgaaggatacaaaaagcacataaaacaccat
tgcaacaaggtcttgcttcgagtaagaatgctgtattacttaaaacaagaagtcattggt
aatgaattccaaaaggtgtttgatggaattgatgccagtgaaattgatgtttgggtccct
gagccagatcactctgaagttcctgccgagtggtgggatgcagaggcagataagtccctt
ctaattggagtttttaaacatggttatgaaaaatacaacactatcagagcagacccagcg
ctgtgcttcttagaaagggtcggcaagccagatgaaaaagcagttgctgctgaacagaga
gcaaatgattatattgatggggatgtagaagatccagaatataaaccagcaccagcaatg
tttaaagatgacatagaggatgatgtttcatccccaggtgatctagtaatagcagatgga
gatggacaaatgatggaaggagacaaaatctattggcccactcagtctgccttaacaacg
cgtcttcgacgcctaataacagcttatcaacgaacaagtaaaaacaggcaagcccagcag
atccagccatcattcccaatacaaactaatatgatgcagcctccatatgaagaagctgct
ctaaatccaaagatggctgctaagattgaaagacagcaaagatggacgagaagagaagaa
gctgacttttacagagttgtgtccacatttggagtggtgtttgatcctgacaggggacga
tttgattggaccaaatttagagcaatggctagactacataagaaaactgatgagagctta
gagaagtacttgtatgcctttatgtcaatgtgccggagagtctgtcgtctcccctcaaaa
gaagaacttgtagacccaaacatttttatccagccaattacagaggagcgtgcttctcgg
actttgtatcgcattgaactcctaaggaaagtgcgagaacaggctcttagacacccacag
ctgtttgaacgactaaaactatgccagccaaacccagacttacctgtctggtgggagtgt
gggactcatgacagggatttacttattggagctgctaaacacggagttagcaggacagat
tatcatattcttcgtgatcctgaactctcatttatgtctgcccagaggaactataatcaa
aataaagtggcactctcaaggacttctactccactcttgcatcagtaccagatggcatta
tctgcttctcctcttacacctcagtcaagattgtcagatgctaaagtgaatgcttttgag
gacgcaaaagctaaaaacgaaaatctgaaagaggatcctcagtcttctgaagaggaatct
atgtctacagaggagacacagacaataatgaaatctgaacctttgagtccaaaaaatggc
acaccaatacaaaatacagaccacaaacctagcatgaagactgaaacagacaggcgcatg
gtggcagcaaggacagagcctctaactccaaacccagcttccaaaaaacagagagtcagc
aaaaggggatctgactctagctctgactcagactctgactcggatagatcatcctgttct
tccaggtcatcatcttcatcctcttcgtcttcctcgtcttgttcacactctcgatcaggc
tctagctcttcatcatcttcatcttgttcttcagcatcttcatcctcatcctcatcgtcg
tcatcgtcgtcgtcgtcatcgtcatcatcgtctgaagagagtgatagtgatgaagaggaa
gcacaaaaacgtgcagaaggaaccgcacatataaaagcgtatgatgaagagagtgtagcc
tctctgagtacaacacaagatgagacgcaagacagtttccagatgaacaatgggacacca
aattccagttatctcctacaaggtggatacatgttggctgcatcctactggccaaaggat
cgagttatgattaatcgacttgacagtatttgtcaaacagtgttgaaaggtaaatggcct
tcagcaagaaggagctatgacagcaatacggtggcatctttctacacaaccaagcttctg
gatagccccggtgcagctgcagattacagtgagcccagcgcaccaacaccccctcttgca
ggtgttaaagaagaatatgatcaatcaccacagatgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccatttgaaagcgaggaaggtgcactgggacagcagcaa
tacctggctcggctacgtgaactccagaatgcttcagaaaccagccttgtcaacttccca
aaatcacttcccaaatcaggtacttccagtcacttaacagccagtgccaatggagtcata
gttgacagtcagcctgtagtcaaaaagagaagaggaagaaggaagaatgtggagggagtt
gatgtcctcttcataaatagaaataaacagcctaatcatgttaatccaggtattaactcc
tgtcaagttgctgcaggaataaacccagcactcacttacacgcagtcccaaggcatgctt
gatgcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgcaggtgat
gatgcccccaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcaggagcttgtattcctaggatgcagttgcatgatgggaggcccaaacaaaaaaga
caccgttgtcgaaaccctaataaactggacgttaatagtttgactggggaagaacgtgtt
cagctcataaatagaagaaatgcaagaaaggtagggggtgcgtttgctccccctctgaag
gatctgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgaatggggagaa
gttgtaaaacagtctggatttcttccagaaggtatgtttgaccgtattctcactggacct
gttgtgcgggaagaagtaagccggaggggaaggcgccccaaaagtgagattgctaaggca
acagcagctgcagcagctgccaccgctgcaagtgtatcagttaaccctctgctagctaac
ggattgcttccaggagtggatctgcctagtcttcaggccttacaacaaaacctgcaaaac
ctgcagtcgctgcaagtaacagcaggattaatgggaatgccagctggcttaactactgga
ggagaagcgaagaacatggctgccatgttccccatgctgctgtcagggatggctggatta
ccaaacttgctgggcatgggaggacttctaacaaagtctacagaatctatttcagaggaa
aaaaagggaagcgattcaaaggaggcagataaaaagaaagaaaggacagaagaccaaaat
acagatactggtggtgaaaactctgtttcaagttctccttcaacatcctctgctgctgca
gctgccaatcctctctctcttaacccattacttttgtccaacatactttacccagggatg
cttctcactccaggccttaatcttcatatcccagctttgtctcagtctaatatttttgat
gtacagaacagtgaaagcaatgacacaggctcagccaagcccacagaagaaaaggaggaa
aattctagggttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaa
aacagcacagatgagggttcagagaaagcagatgcttcatctggatctgatagtacatcg
tcttcatctgaggattcagattctagcgatgaagactga
DBGET
integrated database retrieval system
