Haliaeetus leucocephalus (bald eagle): 104842741
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Entry
104842741 CDS
T08630
Symbol
SCAF4
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
hle
Haliaeetus leucocephalus (bald eagle)
Brite
KEGG Orthology (KO) [BR:
hle00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hle03021
]
104842741 (SCAF4)
03041 Spliceosome [BR:
hle03041
]
104842741 (SCAF4)
Transcription machinery [BR:
hle03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104842741 (SCAF4)
Spliceosome [BR:
hle03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
104842741 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104842741
NCBI-ProteinID:
XP_010583569
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
MEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSR
HQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDM
AAGTSATAPMTENATNNEGSPPPPVKVPSEPPQVTANSVPTVPQLPSSDAFAAVAQLFQT
TQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQPPEQKTAFPPPEQKT
SFDKKLLDRFDYDDEPEAVEDAKKEDSAPSPSVSQPALTSLSFSAQAGWCSIPGGFPGEG
IQQPVFPQLPNMDPFQQRMMGIQQDPMRHQVPLPPNGQMPGFGLLPTPQFPPMAQPVIPP
TAPVQQTFQSPFPVQSESHMQKTHQQDMEVEQPPIQEGKRHVSDNRKSRSRSASRSPKRR
RSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERERERRSKGLPQIKSETVSVC
STTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKLSRG
NFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDLESFCEGGMLDNETL
SPEWKGIPKKSENEVAQNGGAEATHNEPVSPIPKALPVPIPVPMPAPITVPPPQVPPHPS
GPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPMHLPPGFLPPGPPPPIT
PPVSVPHTPAVNIPNSTATGVNEDTTKDSSVGNPIPTVVSGSRGNAETTDSSKIYGTVPP
PVAPTNVPAPVTQAIPLLGTQGVAPPPPAPVVGLQTPSTGLLGARPGLIPLQRPPGMPPP
PLQRFPLMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPGHFVRPGGMPGSGGPG
GPEDNRDGRQFRNDRQTFTPNRDQERFGRRSFGNRVENDRERYGNRNDDRDHERLGNRDR
RDWGRRSPERDRHRDLEDRNRRSSGHRDRERDSRDRESRRDKEENRGKEKSEMTDRADGD
KNHESHSGKMEDADIVSELAAGESESTGVKPVEELTSEATSSVEQAEKDMGSVAEAPR
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacctcctatttcgcgagcaaaaatgattctcatcacaaaagctgccatt
aaagctattaagctctacaagcatgttgtccagattgtagagaagtttatcaaaaagtgc
aaaccggaatataaagtccctggattgtatgtcatcgactctattgttcgtcagtctcgt
caccagtttggaacagacaaagatgtttttgggccaagattctctaaaaatattactgcc
acattccagtatttgtatctctgtccatctgaagacaagagtaaaatagtacgtgtcctg
aacctttggcagaaaaatggagtatttaaaattgaaataattcaacctcttctggatatg
gcagcaggaactagtgccactgcaccaatgacagaaaatgctactaataatgaaggttcg
ccgccccctccagtaaaggttccttcggagccccctcaagttactgctaactcagtgccg
actgtgccacagttgcccagttctgatgcctttgcagctgtagctcagttgtttcaaaca
acacaaggacaacagcttcagcaaattcttcagacttttcaacagcctcaaaaaccccag
tcaccagtcatagataacactgtgatggctcaggttcaagctattactgctcagttgaaa
actacagcagcacaaccaccagaacaaaaaactgctttcccaccacctgagcaaaaaaca
tcatttgacaaaaagctgctggatcggtttgactatgatgatgaaccagaagcagtggaa
gatgcaaagaaagaagattcagctccttctccttcagtttctcagccagctttgacctct
ctctcattcagtgcacaggctggatggtgctcaatacctggtggatttccaggagaaggt
atacaacagccagtatttcctcaactcccaaatatggatccttttcagcagcgaatgatg
ggaatacagcaagatccaatgcgtcaccaggttccacttcctcctaatgggcaaatgcca
ggttttggtctcctgcctacgccacagtttccacccatggctcagcctgtgattccgcca
acagcacctgtgcagcaaacttttcagtctccttttccagtacagagtgaatcacacatg
caaaaaacacatcagcaggatatggaggtggaacagccaccaattcaagagggaaaacga
catgtttctgacaacagaaagtcaagatctagatccgcatcaaggtcacctaaaaggaga
cgttcaagatctggctcccgatctcgaaggtcacgtcatcgtcgatctcgatctcggtcc
agggatagacgccgacactctcctaagtctcggtcacaagaaagacgtgaacgtgagagg
gagagagaacgcagatcaaaaggccttcctcagatcaagtcagaaactgttagtgtttgt
agtactacgctttgggtaggacaacttgacaaaaggacaactcaacaggatgttggaagt
cttttggaggagtttggcccaattgaatcaataaatatgataccacctagaggatgtgcc
tatattgtaatggttcacagacaagatgcttaccgtgccctacagaaactgagccgagga
aacttcaaagtcaatcagaaatctataaagattgcatgggctttgaataaaggaataaag
ccagattacaagcagtattgggatgtagaattaggtgttacttacataccatgggacaaa
gtgaaacctgaagatcttgaaagtttctgcgaaggaggaatgttggacaacgaaactctt
agtccagagtggaaggggattcccaagaagtctgaaaatgaagtggctcaaaatggaggc
gcagaagctacacataatgaaccagtgtcacctattcctaaagctttacctgttccaatt
cctgttcctatgcctgcaccaataacagtacctcctccacaggttccaccacatccatca
ggtcctcctgtggttggtgcactccaaccacctgctttcacagcacctttaggaatccca
cctcctggatttgctcctggagtgccaccaccaccaccgcctccatttttacgacctggt
ttcaacccaatgcatttacccccaggctttcttcctcctggaccaccaccacctataact
cctccggtatctgttcctcacactccggcagtaaacatcccaaattctacagcaactggt
gtgaatgaagacactacaaaagattcatctgtaggaaatcccatcccaacagtggtttct
ggatccagagggaatgccgaaactactgatagttccaaaatatatgggactgttccacct
cctgtagcacctactaatgtacctgctcctgtgacccaagctattccacttcttggcact
caaggagttgcgccgcccccaccagcccctgttgttgggttgcagactccatccactggc
ctcttaggtgcccggcctggtttgataccactccagcgaccgccaggaatgccaccccct
cctctgcagcggtttcccttgatgccaccgcgacacatgcctccccacatgatgcacaga
gggcccccgccggggccagggggctttgggatgcctcccccccacggaatgaaaaccccc
ttcccaccgccaggtcactttgtgagacctggggggatgccgggaagcggggggccaggc
ggacccgaggataacagagatgggaggcagtttaggaatgacaggcagacgttcacgcct
aacagagaccaggaaaggtttggaaggagatctttcggaaatcgggtagaaaacgatcgt
gagcgctatggtaaccgcaacgatgacagagatcacgagcgacttggtaatcgtgacagg
cgagactggggacgaagaagccctgagcgtgatagacacagagacttggaggacagaaac
aggcggtccagtggccatcgagacagagagagagattcgagagatagggagtctcgtaga
gacaaggaagaaaatcgaggaaaggaaaaatcagagatgacagacagggcagatggtgac
aaaaaccatgaatctcatagcggcaaaatggaagacgcagacattgtttcagaacttgct
gcgggagagtctgaatctacaggtgtaaaacctgttgaagagttaacatccgaggctacc
tcatctgtggaacaagcggaaaaggatatgggctcagtggcggaggctcctcgctag
DBGET
integrated database retrieval system
