KEGG   Haemaphysalis longicornis (longhorned tick): 144144943
Entry
144144943         CDS       T11551                                 
Symbol
Rfc3
Name
(RefSeq) replication factor C subunit RfC3
  KO
K10756  replication factor C subunit 3/5
Organism
hlg  Haemaphysalis longicornis (longhorned tick)
Pathway
hlg03030  DNA replication
hlg03410  Base excision repair
hlg03420  Nucleotide excision repair
hlg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hlg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    144144943 (Rfc3)
   03410 Base excision repair
    144144943 (Rfc3)
   03420 Nucleotide excision repair
    144144943 (Rfc3)
   03430 Mismatch repair
    144144943 (Rfc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hlg03032]
    144144943 (Rfc3)
   03036 Chromosome and associated proteins [BR:hlg03036]
    144144943 (Rfc3)
   03400 DNA repair and recombination proteins [BR:hlg03400]
    144144943 (Rfc3)
DNA replication proteins [BR:hlg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    144144943 (Rfc3)
  DNA Replication Termination Factors
   ELG1-RFC complex
    144144943 (Rfc3)
Chromosome and associated proteins [BR:hlg03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    144144943 (Rfc3)
DNA repair and recombination proteins [BR:hlg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     144144943 (Rfc3)
  Check point factors
   HRAD17(Rad24)-RFC complex
    144144943 (Rfc3)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_24 AAA_lid_RFC1 AAA_assoc_2 AAA_22 AAA_11 RuvB_N AAA_14 DEAD DUF815 AAA_16 AAA_30 nSTAND_NTPase5 RCF1-5-like_lid AAA_5 AAA_7 AAA_28 AAA_19 Mg_chelatase BrkDBD DNAX_ATPase_lid Delta_lysin
Other DBs
NCBI-GeneID: 144144943
NCBI-ProteinID: XP_077532571
LinkDB
Position
Unknown
AA seq 328 aa
MSGKQEASTNLPWVEKYRPQKLDDLIAHEDIISTIGRFIKEDRLPHLLFYGPPGTGKTST
ILACAQQIYTPKEFGSKVLELNASDDRGIGIVRGEILNFASTKTIFNSGFKLIVLDEADA
MTNDAQNALRRVIEKFTENARFCLICNYLSKIIPALQSRCTRFRFGPLSAAQMSPRIDHV
ITQERLTVTADGKKALMELAQGDMRKALNILQSTSMAFEEVNETNVYLCVGHPLKEDISD
IVSTLLNEDFTFCYSHINKLKVGKGLALQDVLTQVHLYVHRVELPDDVKMYLIDKMSQIE
YRLASGTSEKIQLSSLISAFQVARQMVV
NT seq 747 nt   +upstreamnt  +downstreamnt
ctcaatgcttctgacgacagaggaattggcattgttcgtggagagatcttgaactttgcg
agcacaaagaccatatttaattctggtttcaagctaatcgtgctcgatgaagccgatgcc
atgacaaacgacgcacagaacgctttacgcagagtgatagagaagttcacggagaatgcc
cgcttctgcctcatctgcaactacctgtccaagatcattccagcgctgcagtctcggtgc
actcgcttccgcttcggacctctgtcggcagcgcagatgtcgccccgcattgatcacgtg
atcactcaggagaggctgactgtcacggctgatggcaagaaagcactcatggaactggct
cagggtgacatgagaaaagcgctgaacatccttcagagcaccagcatggcctttgaggag
gtgaacgagaccaacgtctacctgtgcgtggggcaccctctcaaggaggacatcagcgac
attgtcagcaccctgctcaacgaggacttcaccttctgctacagccacattaacaagctg
aaagttgggaagggtttggcccttcaagatgtgctgacgcaagttcacctctacgtccac
agggttgaacttccagacgatgtgaagatgtacctgattgacaagatgtctcaaatagag
taccgtcttgcatctgggaccagcgaaaagatccagctcagctctctcatctcagcgttc
caagtggccaggcagatggtggtctga

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