Haemaphysalis longicornis (longhorned tick): 144158740
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Entry
144158740 CDS
T11551
Symbol
Polr2b
Name
(RefSeq) RNA polymerase II subunit RpII140
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
hlg Haemaphysalis longicornis (longhorned tick)
Pathway
hlg03020
RNA polymerase
hlg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hlg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
144158740 (Polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
144158740 (Polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hlg03021
]
144158740 (Polr2b)
03400 DNA repair and recombination proteins [BR:
hlg03400
]
144158740 (Polr2b)
Enzymes [BR:
hlg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
144158740 (Polr2b)
Transcription machinery [BR:
hlg03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
144158740 (Polr2b)
DNA repair and recombination proteins [BR:
hlg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
144158740 (Polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
144158740
NCBI-ProteinID:
XP_077545957
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYEAEEDGFGEDESEEITPDLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DTPQIDLQAEAQHTSGEIENPPRYLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVLKENEEAVETQHQKTFIGKIPIMLRSTYCLLNNLTDRDLSELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFQMKDSKYAYKAECRSCLEHSSRPTSTLWVNML
ARGGQGVRKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYSREILQKEMLPHVGVSDFCETK
KAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLMAFLFRGLFRNLTKEVRMYAQ
KFIDRGKDFNLELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTYASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMSYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIAEATKIFVNGCWVGIHRDPDQLMNTLRKLRRQMDIIVSE
VSMVRDIRDREIRIYTDAGRICRPLLIVEDQKLLLKRRHIDNLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLSMTPDDLQDKGLAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGIYITNFHVRMDTLAHVLYYPHKPLTTTRSMEYLRFRELPAGINSIV
AIMSYTGYNQEDSIIVNASAVDRGFFRSVFYRSYKDSECKRVGDQEEQFEKPTRETCQGM
RNAIYDKLDDDGIIAPGTRVSGDDVIIGKTITLPENDDDLESTNRRFTKRDASTFLRNSE
TGIVDQVMLTVNAEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGITYRQEDMPFTAEG
LTPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDSVNVQKISNLLQEYGY
HLRGNEVMFNGHTGRKVNAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRAR
DGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRAHICNLCGLLAIANLRNNTFECKGC
RNKTQISQIRLPYACKLLFQELMSMSIAPRMMVL
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagcagaagaagatgggtttggggaggacgagtcggaggagatcacccccgac
ctgtggcaggaggcgtgctggatcgtcatcagtgcctacttcgacgagaagggcctggtg
cggcagcagctggactccttcgacgagttcatccagatgtccgtgcagcgcatcgtcgag
gacacgccgcagatcgacctccaggcagaggcacagcacacctcgggcgagatcgagaat
ccgccccgctacctgctgaagtttgagcagatctacctgtccaagccgacccactgggaa
aaggatggagctcccagccccatgatgcccaacgaggcgcggctgcggaacctcacctat
tcggcaccactttacgtggacataaccaagacggtgttaaaagagaacgaggaggcagtg
gagacgcaacaccagaagacattcattggcaagatccccatcatgcttcgctccacctac
tgcctgctcaacaacctcacggaccgtgacttgagcgagctgaacgagtgcccgctggac
cccggcgggtacttcatcatcaacggctcggaaaaggtgctgatagcgcaggagaagatg
gcaaccaacacggtgtacgtgttccagatgaaggactccaagtacgcctacaaggcggag
tgccgctcctgcctcgagcactcctccaggcccacaagcaccctctgggtcaacatgctc
gccaggggagggcagggcgtgcgcaagagcgccatcgggcagcgcatcatcgccatcctg
ccgtacatcaagcaggagatcccgatcatgatcgtgttccgggcgctgggcttcgtggcg
gaccgggacatcctggagcacatcatctacgacttcgaggaccccgagatgatggagatg
gtgaagccctcgctggacgaggcctttgtcatccaggagcagaacgtggcgctcaacttc
atcggctcccgcggggcccggccgggcgtcaccaaggagaagcgcatcaagtactcgcgc
gagatcctccagaaggagatgctgccccacgtgggtgtcagcgacttctgcgagaccaag
aaggcctactacctcggctacatggtccaccgcctcctgctcgctgccctgggtcgccgg
gagctcgacgaccgcgatcactacggcaacaagcggctggacctggcggggcccctgatg
gcgttcctcttccggggcctcttccgcaacctcaccaaggaggtgcgcatgtacgcgcag
aagttcatcgaccgcggcaaggacttcaacctcgagctggccatcaagacgcgcatcatc
accgacggcctgcgctactccctcgccacgggcaactggggcgaccagaagaaggcccac
caggcccgcgcgggcgtctcacaggtgctcaaccggctgacctacgcctcaacgctgtct
cacctgcggcgcgtcaactcgcccatcgggcgcgacggcaagctggccaagccgcgccag
ctgcacaacaccctgtggggcatgatctgccccgccgagacgcccgagggccacgccgtc
ggcctcgtcaagaacctggccctcatgtcctacatctcggtcggctcgcagccctcgccc
atcctggagttcttggaggagtggagcatggagaacctcgaggagatcgccccgtcggcc
atcgccgaggccaccaagatcttcgtcaacggctgctgggtcggcatccaccgggacccc
gaccagctgatgaacacgctgcgcaagctgcgccggcagatggacatcatcgtgtccgag
gtgtccatggtgcgcgacatccgcgaccgcgagatccgcatctacacggatgccggccgc
atctgccggcccctgctgatcgtcgaggaccagaagctgctgctcaagcggcgccacatc
gacaacctgaaggagcgcgagtacaacaactacagctggcaggacctggtcgccagtggg
gtagtcgagtacatcgacaccctggaggaggagacggtcatgctgtccatgacccccgac
gacctgcaggacaagggcctggcgtactgctcgacgtacacccactgcgagatccacccg
tccatgatcctgggcgtgtgcgcctccatcatcccctttccggatcacaaccagtcgccc
cgtaacacgtaccagtcggctatggggaagcaggccatgggcatctacatcaccaacttc
cacgtgcgcatggacaccctggcgcacgtgctgtactacccacacaagccgctgaccacg
acgcgctccatggagtacctgcgcttccgagagctgcccgcgggcatcaactccatcgtg
gccatcatgtcctacacgggctacaaccaggaggactccatcatcgtcaatgcctccgcc
gtcgaccggggattcttcaggtcggtgttctaccggtcatacaaagactcggagtgcaag
cgtgtcggggaccaggaggaacagtttgagaagccgaccagggaaacctgtcaaggcatg
cggaacgccatctacgacaaactggatgacgacggcatcatagctccaggcacgagagtg
tctggagatgatgtcatcattgggaagactatcaccttgccagagaatgacgacgatctg
gagagcaccaaccgtcgcttcaccaagcgtgacgcaagcacgttcctgcgaaacagcgag
acgggcatagtggaccaggtgatgctaacagtgaacgccgagggatacaagttctgcaag
atccgtgtgcgctccgtgcgcatcccccagatcggggacaagttcgccagtcgccacgga
cagaagggaacctgcggcatcacctaccgccaggaggacatgcccttcacggccgaaggg
ttgacgccggacatcatcatcaacccccacgccatcccgtctcgtatgaccatcggccat
cttatcgagtgccttcagggcaaggtgtcggccaacaagggcgaaattggagacgcgacg
cccttcaacgactcggtcaacgtgcagaagatctccaacctgctgcaagagtacggctac
cacctcagagggaatgaggtgatgttcaacggccacacgggccgcaaggtgaacgcccag
atcttcctgggccccacctactaccagcggctgaagcacatggtggacgacaagatccac
tcccgggcgcgggggcccgtccagatcctggtccgacagcccatggagggcagggccaga
gacggtgggctgcgtttcggggagatggagcgcgactgccagatctcgcacggggcggcc
cagtttctgcgcgagcggctgttcgaggtgtccgacccctacagggcccacatctgcaac
ctgtgtggcctcctggccatcgccaacctgcgcaacaacaccttcgagtgcaagggctgc
cgcaacaagactcagatatctcagatccggctgccgtatgcctgcaagctgctcttccag
gagctgatgtcaatgtcgatagcaccacgtatgatggttttgtaa
DBGET
integrated database retrieval system
