Haemaphysalis longicornis (longhorned tick): 144169807
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Entry
144169807 CDS
T11551
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like isoform X1
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
hlg
Haemaphysalis longicornis (longhorned tick)
Pathway
hlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144169807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlg03041
]
144169807
Enzymes [BR:
hlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
144169807
Spliceosome [BR:
hlg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
144169807
Complex B
144169807
Complex C
U2 SnRNP specific factors
144169807
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
144169807
NCBI-ProteinID:
XP_077555290
LinkDB
All DBs
Position
Unknown
AA seq
889 aa
AA seq
DB search
MDYRIDMFHKGGEGRPRGFGFGSFAVSAKKPDPQLGRSAFQPETTPVPALPVVNRHGYTG
LSTITQNALDINYGNLRKRPKTEEEYFEQDEDDGRGGQLAYIPAPGSPTWDEQQQQQGAD
NSESDEDPLDAYMADIEKKLEKDKGKPSRAKNVKVPEKETKFKEELKGVRDDIENEDDEE
SYYRYIEENPDLAANKDDSDVELEYDEDGNPIAPAKSKYIDPLPPIDHSTIEYKEFTKNF
YVEHEDIAKLNDAEVEELRATLGVKVTGALPLKPVTSFGHLGFDEPLLRAIRKAEYSQPS
PIQAQGVPVALSGRDMIGIAKTGSGKTAAFIWPLLIHIMDQKELAPGDGPIGLILAPTRE
LAQQIYLEAKRFGKVYNVAAACCFGGGSKWEQSKALQEGVEIVVATPGRMIDMIKMKATN
LERVTFLVLDEADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKRKVERLARDVLTDPI
KVVQGDQGEANEDVTQNVLVIPSNPPGYKWNWLTAHLIEFTSVGSVLIFVTKKANAEELA
NNLQTQDHSVGLLHGDMEQNDRTKVIASFKKKEFPILVATDVAARGLDIPHVKTVVNYDI
ARDIDTHTHRVGRTGRAGEKGVAYTLITDKEKEFAGHLVRNLEGASQHVPQSLMDLAMQS
QWFKKSRFKQGKGKKLNVGGHGLGFRTRERPGLGCPEDGLSQRPAPAAGPMSGQGSYTAS
VLSGPRFVAASNSSDSGRGGFSSSAAPSSSSRHGSGPQTDRLSSMRAAFQAQYKSQFTAA
TDTSWKLGLPQSPPRRPPSPPRHLPFIPPAPFAPPAAPVLPFAMPAPPPPPADSRHESRE
SDSKSRDSSSHQRSFSHDSSRQQQAHQDSNGTPKEDTSRRRNRKSRWDI
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggactatcgaatcgacatgtttcataagggaggagaagggcgaccgaggggctttggc
ttcggcagcttcgcggtttctgcgaagaaacccgaccctcagcttggtcgcagtgctttt
caaccagagactacacctgtgccagctttgccggtggttaacaggcacggctacactggc
ctgagcacgataacccagaacgctcttgacatcaactacggcaacctccgcaagcggccc
aagaccgaggaagagtactttgaacaggatgaggacgacggccgtggggggcagctggcc
tacatcccggcccccgggagccccacgtgggacgagcagcagcagcagcagggggcggac
aactcggagagtgacgaggacccactcgacgcctacatggctgacattgagaaaaagctg
gaaaaagacaagggaaagccttctcgtgcaaagaacgtcaaggtgccagaaaaggagacg
aagttcaaagaagagctgaagggtgtccgtgacgacatcgaaaacgaggatgacgaggag
tcgtactacaggtacattgaggagaaccccgaccttgcagccaacaaggatgacagcgat
gtcgaactggaatacgatgaggacggtaatcccattgccccggcaaagtccaagtacatt
gacccgctgccacccatcgaccactcgaccatcgagtacaaggagttcaccaagaacttc
tacgtggagcacgaggacatagccaagctgaacgatgccgaagtggaggagctacgcgcg
accctcggggtcaaggtgacgggggcgctcccgctgaagcccgtcaccagcttcggccac
ctgggcttcgacgagccactgctcagggccattcggaaggcggagtactcgcagccatcg
cccatccaggcgcagggggtgccagttgcgctgagtggccgggacatgattggcattgcc
aagactggctcaggcaagacggccgcattcatctggcccctcttgatccacatcatggac
cagaaggagcttgcgcctggtgacggtcccatcggcctgattctggctccaacgagagag
ttagctcagcagatctacctggaggccaaacggtttggcaaggtgtacaatgtggctgcg
gcctgctgcttcggcggcggcagcaagtgggagcagtcgaaggcgctccaggaaggagtg
gagattgtcgtcgccacacccggtcgcatgatcgacatgatcaagatgaaagccaccaac
ctggagcgtgtcacgttccttgtgctggatgaagcggaccgcatgtttgacatgggattt
gaacctcaggtgcggtccatctgcgatcatgttcggccagacaggcagacgctgatgttc
agcgccacgttcaagcgcaaggtggagcgtctggcgcgcgacgtgctcacggaccccatc
aaggtggtgcagggagaccagggggaggcgaacgaggacgtgacgcagaacgtgctcgtc
atccccagcaacccgcccggctacaagtggaactggctcaccgcccacctgatcgagttc
acctcggtgggcagtgtgctgatctttgttacaaagaaggccaacgccgaagagttggcg
aacaatctccagacgcaggaccactctgtgggcctcttgcatggagacatggaacaaaat
gaccgaaccaaggtgattgcgtccttcaagaagaaagagtttcctattctcgtggccacg
gatgttgctgcgcgtggtctggacatccctcacgtgaagacggtagtgaattacgacatc
gctcgggacattgacactcacacccaccgagttggcaggactggccgagcaggggagaag
ggtgtcgcgtacacgctgatcacggacaaggagaaggagtttgcgggccacctggtgcgc
aacctggagggcgccagccaacatgtgccccagagcctcatggacctcgccatgcagagc
cagtggttcaaaaagtcccgcttcaagcaaggcaagggcaagaaactcaacgtgggaggc
catggactgggctttagaaccagggagcgcccaggcctgggctgccccgaagacggccta
agccagaggccggcacccgcggccggtcccatgtcagggcaaggcagttacacggccagt
gtgctgtcgggcccaaggtttgtggctgcttcgaactcctctgacagcggcaggggcggc
ttctcttcctctgcggcgccgtcttcctcctcccgccatggatcaggtccccagacagac
aggctgtcttccatgagggccgcttttcaggctcaatacaagtcgcagttcacggctgcc
acggacacctcgtggaagctggggctgccgcaatcacccccccgccgacccccctctccg
ccacggcacttgccgtttattccccccgccccgttcgccccaccggcagcccccgtgctg
cccttcgccatgccggcgccccctccaccaccggcagactctcgccacgagtcacgcgag
agtgactccaagagccgggacagttcgagccaccagcggtctttcagccacgactcttcg
agacagcagcaagctcatcaagacagcaacggcacacccaaggaagacacgtcaaggaga
aggaacaggaaatcgcgttgggacatttga
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