Haemaphysalis longicornis (longhorned tick): 144169808
Help
Entry
144169808 CDS
T11551
Name
(RefSeq) ATP-dependent RNA helicase DDX42-like
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
hlg
Haemaphysalis longicornis (longhorned tick)
Pathway
hlg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hlg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
144169808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hlg03041
]
144169808
Enzymes [BR:
hlg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
144169808
Spliceosome [BR:
hlg03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
144169808
Complex B
144169808
Complex C
U2 SnRNP specific factors
144169808
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
144169808
NCBI-ProteinID:
XP_077555292
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MFHKGGEGRPRGFGFGSFAVSAKKPDPQLGRSALQPETTPVPALPVVNRHGYTGLSTITQ
NALDINYGNLRKRPKTEEEYFEQDEDDGRAGQLAYIPAPGSPTWDEQQQQLGADNSESDE
DPLDAYMADIEKKLEKDKGKPSRAKNIKVPEKETKFKEELKGVRDDIENEDDEESYYRYI
EENPDLAANKDDSDVELEYDEDGNPIAPAKSKYIDPLPPIDHSTIEYKEFTKNFYVEHED
IAKLSDAEVEELRATLGVKVTGALPLKPVTSFGHLGFDEPLLRAIRKAEYSQPSPIQAQG
VPVALSGRDMIGIAKTGSGKTAAFIWPLLIHIMDQKELVPGDGPIGLILAPTRELAQQIY
LEAKRFGKVYNVAAACCFGGGSKWEQSKALQEGVEIVVATPGRMIDMIKMKATNLERVTF
LVLDEADRMFDMGFEPQVRSICDHVRPDRQTLMFSATFKRKVERLARDVLTDPIKVVQGD
QGEANEDVTQNVLVIPSNPPGYKWNWLTAHLVEFTSVGSVLIFVTKKANAEELANNLQTQ
DHSVGLLHGDMEQNDRTKVIASFKKKEFPILVATDVAARGLDIPHVKTVVNYDIARDIDT
HTHRVGRTGRAGEKGVAYTLITDKEKEFAGHLVRNLEGASQHVPQSLMDLAMQSQWFKKS
RFKQGKGKKLNMGGHGLGFRTRERPGLGCPEDRPSQRPAPAAGPMSGQGSYTASVLSGPR
FVAASNSSDSGRGSFSSSAAPSSSSRHGSGPQTDRLSSMRAAFQAQYKSQFTAATDTSWK
LGLPHSPPRRPPSPPRHLPFIPPAPFAPPAAPVLPFAMPAPPPPPADSRHESRESDSKSR
DSSSHQRSFSHDSSRQQQAHQDSNGTPKEDTSRRRNRKSRWDI
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgtttcataagggaggagaagggcgaccgaggggctttggcttcggcagcttcgcggtt
tctgcgaagaaaccggaccctcagcttggtcgcagtgctcttcaaccagagactacacct
gtgccagctttgccggtggttaacaggcacggctacactggcctgagcacgataacccag
aacgctcttgacatcaactacggcaacctccgcaagcggcccaagaccgaggaagagtac
tttgaacaggatgaggacgacggccgtgcggggcagctggcctacatcccggctcccggg
agccccacgtgggatgagcagcagcagcagctgggggctgacaactcggagagtgacgag
gacccactcgatgcctacatggcggacattgagaaaaagctggaaaaagacaagggaaag
ccttcccgtgcaaagaacatcaaggtgccagaaaaggagacaaagttcaaagaagagctg
aagggtgtccgtgacgacatcgaaaacgaggatgacgaggagtcgtactacaggtacatt
gaggagaaccccgaccttgccgccaacaaggatgacagcgatgtcgaactggaatacgat
gaggacggtaatcccattgccccagcaaagtccaagtacattgacccgctgccgcccatc
gaccactcgaccatcgagtacaaggagttcaccaagaacttctacgtggagcacgaggac
atagccaagctgagcgatgccgaagtggaggagctgcgcgcgaccctcggggtcaaggtg
acgggggcgctcccgctgaagcccgtcaccagcttcggccacctgggcttcgacgagcca
ctgctcagggccattcggaaggcggagtactcgcagccatcgcccatccaggcgcagggg
gtgccagttgcgctgagtggccgggacatgattggcattgccaagactggctcaggcaag
acggccgcattcatctggcccctcttgatccacatcatggaccagaaggagcttgtgcct
ggtgacggtcccatcggcctgattctggctccaacgagagagttagctcagcagatctac
ctggaggccaaacggtttggcaaggtgtacaatgtggctgcggcctgctgcttcggcggc
ggcagcaagtgggagcagtcgaaggcgctccaggaaggagtggagattgtcgtcgccaca
cccggtcgcatgatcgacatgatcaagatgaaagccaccaacctggagcgtgtcacgttc
cttgtgctggatgaagcggaccgcatgtttgacatgggatttgaacctcaggtgcggtcc
atctgcgatcatgttcggccagacaggcagacgctgatgttcagcgccacgttcaagcgc
aaggtggagcgtctggcgcgcgacgtgctcacggaccccatcaaggtggtgcagggagac
caaggggaggcgaacgaggacgtgacgcagaacgtgctcgtcatccccagcaacccgccc
ggctacaagtggaactggctcaccgcccacctggtcgagttcacctcggtgggcagtgtg
ctgatctttgttacaaagaaggccaatgccgaagagttggcgaacaatctccagacgcag
gaccactctgtgggcctcttgcatggagacatggaacaaaatgaccgaaccaaggtgatt
gcgtccttcaagaagaaagagtttcctattctcgtggccacggatgttgctgcgcgtggt
ctggacatccctcacgtgaagacggtagtgaattacgacatcgctcgggacattgacact
cacacccaccgagttggcaggactggccgagcaggggagaagggtgtcgcgtacacgctg
atcacggacaaggagaaggagtttgcgggccacctggtgcgcaacctggagggcgccagc
caacatgtgccccagagcctcatggacctcgccatgcagagccagtggttcaaaaagtcc
cgcttcaagcaaggcaagggcaagaaactcaacatgggaggccatggactgggctttaga
accagggagcgcccaggcctgggctgccccgaagacaggccgagccagaggccggcaccc
gcggccggtcccatgtcggggcaaggcagttacacggccagtgtgctgtcgggtccaagg
tttgtggctgcttcaaactcctctgacagcggcaggggcagtttctcttcctctgcggcg
ccgtcttcctcctcccgccacggatcaggtccccagacagacaggctgtcttccatgagg
gcagcttttcaggctcaatacaagtcgcagttcacggccgccacggacacctcgtggaag
ctgggactgccgcactcacccccccgccgacccccctctccgccacggcacttgcccttc
attccccccgccccgttcgccccacccgcagcccccgtgctgcccttcgccatgccggca
ccccctccaccaccggcagactctcgccacgagtcacgcgagagcgactccaagagccgg
gacagttcgagccaccagcggtctttcagccacgactcttcgagacagcagcaagctcat
caagacagcaacggcacacccaaggaagacacgtcaaggagaaggaacaggaaatcgcgt
tgggacatttga
DBGET
integrated database retrieval system
